RNA–Protein interactions for RNA: ENST00000577632.1

CDRT15P1-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 1, humanhuman

BASIC

Gene CDRT15P1, Length 564 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P1-201ENST00000577632 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
CDRT15P1-201ENST00000577632 ABCC9O60706 1549 aa22.87■■□□□ 1.25
CDRT15P1-201ENST00000577632 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
CDRT15P1-201ENST00000577632 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
CDRT15P1-201ENST00000577632 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
CDRT15P1-201ENST00000577632 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
CDRT15P1-201ENST00000577632 NACADO15069 1562 aa21.2■□□□□ 0.98
CDRT15P1-201ENST00000577632 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
CDRT15P1-201ENST00000577632 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
CDRT15P1-201ENST00000577632 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
CDRT15P1-201ENST00000577632 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
CDRT15P1-201ENST00000577632 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
CDRT15P1-201ENST00000577632 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
CDRT15P1-201ENST00000577632 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
CDRT15P1-201ENST00000577632 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
CDRT15P1-201ENST00000577632 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
CDRT15P1-201ENST00000577632 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
CDRT15P1-201ENST00000577632 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
CDRT15P1-201ENST00000577632 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
CDRT15P1-201ENST00000577632 CUX2O14529 1486 aa19.86■□□□□ 0.77
CDRT15P1-201ENST00000577632 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
CDRT15P1-201ENST00000577632 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
CDRT15P1-201ENST00000577632 NESP48681 1621 aa19.55■□□□□ 0.72
CDRT15P1-201ENST00000577632 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
CDRT15P1-201ENST00000577632 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
CDRT15P1-201ENST00000577632 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
CDRT15P1-201ENST00000577632 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
CDRT15P1-201ENST00000577632 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CDRT15P1-201ENST00000577632 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
CDRT15P1-201ENST00000577632 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
CDRT15P1-201ENST00000577632 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
CDRT15P1-201ENST00000577632 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
CDRT15P1-201ENST00000577632 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
CDRT15P1-201ENST00000577632 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
CDRT15P1-201ENST00000577632 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
CDRT15P1-201ENST00000577632 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
CDRT15P1-201ENST00000577632 WDR62O43379 1518 aa19.01■□□□□ 0.63
CDRT15P1-201ENST00000577632 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
CDRT15P1-201ENST00000577632 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
CDRT15P1-201ENST00000577632 WIZO95785 1651 aa18.82■□□□□ 0.6
CDRT15P1-201ENST00000577632 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
CDRT15P1-201ENST00000577632 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
CDRT15P1-201ENST00000577632 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
CDRT15P1-201ENST00000577632 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
CDRT15P1-201ENST00000577632 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
CDRT15P1-201ENST00000577632 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
CDRT15P1-201ENST00000577632 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
CDRT15P1-201ENST00000577632 CFTRP13569 1480 aa18.65■□□□□ 0.58
CDRT15P1-201ENST00000577632 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
CDRT15P1-201ENST00000577632 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
CDRT15P1-201ENST00000577632 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
CDRT15P1-201ENST00000577632 CHD1O14646 1710 aa18.47■□□□□ 0.55
CDRT15P1-201ENST00000577632 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
CDRT15P1-201ENST00000577632 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
CDRT15P1-201ENST00000577632 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
CDRT15P1-201ENST00000577632 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
CDRT15P1-201ENST00000577632 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
CDRT15P1-201ENST00000577632 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
CDRT15P1-201ENST00000577632 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
CDRT15P1-201ENST00000577632 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
CDRT15P1-201ENST00000577632 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
CDRT15P1-201ENST00000577632 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDRT15P1-201ENST00000577632 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
CDRT15P1-201ENST00000577632 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
CDRT15P1-201ENST00000577632 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
CDRT15P1-201ENST00000577632 FBLN2P98095 1184 aa18.18■□□□□ 0.5
CDRT15P1-201ENST00000577632 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
CDRT15P1-201ENST00000577632 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
CDRT15P1-201ENST00000577632 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
CDRT15P1-201ENST00000577632 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
CDRT15P1-201ENST00000577632 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
CDRT15P1-201ENST00000577632 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
CDRT15P1-201ENST00000577632 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
CDRT15P1-201ENST00000577632 SOGA1O94964 1423 aa18■□□□□ 0.47
CDRT15P1-201ENST00000577632 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
CDRT15P1-201ENST00000577632 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
CDRT15P1-201ENST00000577632 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
CDRT15P1-201ENST00000577632 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
CDRT15P1-201ENST00000577632 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
CDRT15P1-201ENST00000577632 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
CDRT15P1-201ENST00000577632 ERCC6L2Q5T890 1561 aa17.92■□□□□ 0.46
CDRT15P1-201ENST00000577632 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
CDRT15P1-201ENST00000577632 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
CDRT15P1-201ENST00000577632 CUX1P39880 1505 aa17.9■□□□□ 0.46
CDRT15P1-201ENST00000577632 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
CDRT15P1-201ENST00000577632 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
CDRT15P1-201ENST00000577632 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
CDRT15P1-201ENST00000577632 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
CDRT15P1-201ENST00000577632 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
CDRT15P1-201ENST00000577632 ABCA10Q8WWZ4 1543 aa17.7■□□□□ 0.42
CDRT15P1-201ENST00000577632 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
CDRT15P1-201ENST00000577632 NUP160Q12769 1436 aa17.67■□□□□ 0.42
CDRT15P1-201ENST00000577632 KDM4FA0A1W2PPD8 638 aa17.59■□□□□ 0.41
CDRT15P1-201ENST00000577632 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
CDRT15P1-201ENST00000577632 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.4
CDRT15P1-201ENST00000577632 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
CDRT15P1-201ENST00000577632 DIP2BQ9P265 1576 aa17.55■□□□□ 0.4
CDRT15P1-201ENST00000577632 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
CDRT15P1-201ENST00000577632 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
CDRT15P1-201ENST00000577632 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms