RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
CUEDC1-205ENST00000577589 ABCC9O60706 1549 aa30.47■■■□□ 2.47
CUEDC1-205ENST00000577589 CCDC180Q9P1Z9 1646 aa29.86■■■□□ 2.37
CUEDC1-205ENST00000577589 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
CUEDC1-205ENST00000577589 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
CUEDC1-205ENST00000577589 NACADO15069 1562 aa28.33■■■□□ 2.12
CUEDC1-205ENST00000577589 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
CUEDC1-205ENST00000577589 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
CUEDC1-205ENST00000577589 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
CUEDC1-205ENST00000577589 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
CUEDC1-205ENST00000577589 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
CUEDC1-205ENST00000577589 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
CUEDC1-205ENST00000577589 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
CUEDC1-205ENST00000577589 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
CUEDC1-205ENST00000577589 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-205ENST00000577589 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
CUEDC1-205ENST00000577589 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
CUEDC1-205ENST00000577589 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
CUEDC1-205ENST00000577589 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
CUEDC1-205ENST00000577589 CUX2O14529 1486 aa26.53■■□□□ 1.84
CUEDC1-205ENST00000577589 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
CUEDC1-205ENST00000577589 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
CUEDC1-205ENST00000577589 NESP48681 1621 aa26.04■■□□□ 1.76
CUEDC1-205ENST00000577589 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
CUEDC1-205ENST00000577589 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
CUEDC1-205ENST00000577589 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
CUEDC1-205ENST00000577589 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
CUEDC1-205ENST00000577589 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
CUEDC1-205ENST00000577589 KIF21AQ7Z4S6 1674 aa25.72■■□□□ 1.71
CUEDC1-205ENST00000577589 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
CUEDC1-205ENST00000577589 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
CUEDC1-205ENST00000577589 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
CUEDC1-205ENST00000577589 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
CUEDC1-205ENST00000577589 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
CUEDC1-205ENST00000577589 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
CUEDC1-205ENST00000577589 WDR62O43379 1518 aa25.4■■□□□ 1.66
CUEDC1-205ENST00000577589 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
CUEDC1-205ENST00000577589 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
CUEDC1-205ENST00000577589 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
CUEDC1-205ENST00000577589 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
CUEDC1-205ENST00000577589 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
CUEDC1-205ENST00000577589 WIZO95785 1651 aa25.04■■□□□ 1.6
CUEDC1-205ENST00000577589 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
CUEDC1-205ENST00000577589 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
CUEDC1-205ENST00000577589 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
CUEDC1-205ENST00000577589 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
CUEDC1-205ENST00000577589 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
CUEDC1-205ENST00000577589 CFTRP13569 1480 aa24.9■■□□□ 1.58
CUEDC1-205ENST00000577589 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
CUEDC1-205ENST00000577589 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
CUEDC1-205ENST00000577589 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
CUEDC1-205ENST00000577589 TOP2AP11388 1531 aaKnown RBP24.64■■□□□ 1.53
CUEDC1-205ENST00000577589 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
CUEDC1-205ENST00000577589 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
CUEDC1-205ENST00000577589 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
CUEDC1-205ENST00000577589 CHD1O14646 1710 aa24.56■■□□□ 1.52
CUEDC1-205ENST00000577589 CYB5RLQ6IPT4 315 aa24.54■■□□□ 1.52
CUEDC1-205ENST00000577589 RSF1Q96T23 1441 aaPredicted RBP24.53■■□□□ 1.52
CUEDC1-205ENST00000577589 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
CUEDC1-205ENST00000577589 TRHP20396 242 aaPredicted RBP24.43■■□□□ 1.5
CUEDC1-205ENST00000577589 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
CUEDC1-205ENST00000577589 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.49
CUEDC1-205ENST00000577589 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
CUEDC1-205ENST00000577589 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
CUEDC1-205ENST00000577589 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
CUEDC1-205ENST00000577589 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
CUEDC1-205ENST00000577589 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
CUEDC1-205ENST00000577589 FBLN2P98095 1184 aa24.17■■□□□ 1.46
CUEDC1-205ENST00000577589 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
CUEDC1-205ENST00000577589 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
CUEDC1-205ENST00000577589 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
CUEDC1-205ENST00000577589 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
CUEDC1-205ENST00000577589 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
CUEDC1-205ENST00000577589 WDR97A6NE52 1622 aa24.04■■□□□ 1.44
CUEDC1-205ENST00000577589 SOGA1O94964 1423 aa24■■□□□ 1.43
CUEDC1-205ENST00000577589 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
CUEDC1-205ENST00000577589 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
CUEDC1-205ENST00000577589 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
CUEDC1-205ENST00000577589 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
CUEDC1-205ENST00000577589 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
CUEDC1-205ENST00000577589 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.41
CUEDC1-205ENST00000577589 CUX1P39880 1505 aa23.89■■□□□ 1.41
CUEDC1-205ENST00000577589 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
CUEDC1-205ENST00000577589 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
CUEDC1-205ENST00000577589 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
CUEDC1-205ENST00000577589 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
CUEDC1-205ENST00000577589 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CUEDC1-205ENST00000577589 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
CUEDC1-205ENST00000577589 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
CUEDC1-205ENST00000577589 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
CUEDC1-205ENST00000577589 NUP160Q12769 1436 aa23.62■■□□□ 1.37
CUEDC1-205ENST00000577589 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
CUEDC1-205ENST00000577589 ABCC10Q5T3U5 1492 aa23.42■■□□□ 1.34
CUEDC1-205ENST00000577589 DIP2BQ9P265 1576 aa23.41■■□□□ 1.34
CUEDC1-205ENST00000577589 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
CUEDC1-205ENST00000577589 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
CUEDC1-205ENST00000577589 ILDR1Q86SU0 546 aaPredicted RBP23.37■■□□□ 1.33
CUEDC1-205ENST00000577589 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
CUEDC1-205ENST00000577589 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
CUEDC1-205ENST00000577589 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms