RNA–Protein interactions for RNA: ENST00000577582.5

CACNB1-207, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-207ENST00000577582 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
CACNB1-207ENST00000577582 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
CACNB1-207ENST00000577582 ABCC9O60706 1549 aa21.21■□□□□ 0.99
CACNB1-207ENST00000577582 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
CACNB1-207ENST00000577582 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
CACNB1-207ENST00000577582 NACADO15069 1562 aa20.55■□□□□ 0.88
CACNB1-207ENST00000577582 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
CACNB1-207ENST00000577582 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
CACNB1-207ENST00000577582 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
CACNB1-207ENST00000577582 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
CACNB1-207ENST00000577582 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.79
CACNB1-207ENST00000577582 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
CACNB1-207ENST00000577582 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
CACNB1-207ENST00000577582 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
CACNB1-207ENST00000577582 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
CACNB1-207ENST00000577582 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
CACNB1-207ENST00000577582 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
CACNB1-207ENST00000577582 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
CACNB1-207ENST00000577582 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
CACNB1-207ENST00000577582 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
CACNB1-207ENST00000577582 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
CACNB1-207ENST00000577582 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
CACNB1-207ENST00000577582 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
CACNB1-207ENST00000577582 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
CACNB1-207ENST00000577582 WIZO95785 1651 aa18.97■□□□□ 0.63
CACNB1-207ENST00000577582 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
CACNB1-207ENST00000577582 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
CACNB1-207ENST00000577582 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
CACNB1-207ENST00000577582 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
CACNB1-207ENST00000577582 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
CACNB1-207ENST00000577582 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
CACNB1-207ENST00000577582 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
CACNB1-207ENST00000577582 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
CACNB1-207ENST00000577582 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
CACNB1-207ENST00000577582 NESP48681 1621 aa18.41■□□□□ 0.54
CACNB1-207ENST00000577582 CFTRP13569 1480 aa18.36■□□□□ 0.53
CACNB1-207ENST00000577582 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
CACNB1-207ENST00000577582 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
CACNB1-207ENST00000577582 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
CACNB1-207ENST00000577582 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
CACNB1-207ENST00000577582 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.51
CACNB1-207ENST00000577582 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
CACNB1-207ENST00000577582 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
CACNB1-207ENST00000577582 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
CACNB1-207ENST00000577582 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
CACNB1-207ENST00000577582 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
CACNB1-207ENST00000577582 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
CACNB1-207ENST00000577582 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
CACNB1-207ENST00000577582 WDR62O43379 1518 aa17.97■□□□□ 0.47
CACNB1-207ENST00000577582 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
CACNB1-207ENST00000577582 CUX1P39880 1505 aa17.93■□□□□ 0.46
CACNB1-207ENST00000577582 CUX2O14529 1486 aa17.92■□□□□ 0.46
CACNB1-207ENST00000577582 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
CACNB1-207ENST00000577582 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
CACNB1-207ENST00000577582 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
CACNB1-207ENST00000577582 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
CACNB1-207ENST00000577582 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
CACNB1-207ENST00000577582 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
CACNB1-207ENST00000577582 SOGA1O94964 1423 aa17.81■□□□□ 0.44
CACNB1-207ENST00000577582 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
CACNB1-207ENST00000577582 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
CACNB1-207ENST00000577582 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
CACNB1-207ENST00000577582 TARBP1Q13395 1621 aaKnown RBP17.7■□□□□ 0.42
CACNB1-207ENST00000577582 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
CACNB1-207ENST00000577582 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
CACNB1-207ENST00000577582 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
CACNB1-207ENST00000577582 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
CACNB1-207ENST00000577582 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
CACNB1-207ENST00000577582 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
CACNB1-207ENST00000577582 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
CACNB1-207ENST00000577582 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
CACNB1-207ENST00000577582 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
CACNB1-207ENST00000577582 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
CACNB1-207ENST00000577582 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
CACNB1-207ENST00000577582 PBRM1Q86U86 1689 aa17.53■□□□□ 0.4
CACNB1-207ENST00000577582 FBLN2P98095 1184 aa17.5■□□□□ 0.39
CACNB1-207ENST00000577582 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
CACNB1-207ENST00000577582 EEA1Q15075 1411 aa17.47■□□□□ 0.39
CACNB1-207ENST00000577582 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
CACNB1-207ENST00000577582 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
CACNB1-207ENST00000577582 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
CACNB1-207ENST00000577582 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
CACNB1-207ENST00000577582 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
CACNB1-207ENST00000577582 IGF1RP08069 1367 aa17.44■□□□□ 0.38
CACNB1-207ENST00000577582 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
CACNB1-207ENST00000577582 CUL7Q14999 1698 aa17.4■□□□□ 0.38
CACNB1-207ENST00000577582 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
CACNB1-207ENST00000577582 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
CACNB1-207ENST00000577582 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
CACNB1-207ENST00000577582 CHD1O14646 1710 aa17.35■□□□□ 0.37
CACNB1-207ENST00000577582 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
CACNB1-207ENST00000577582 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
CACNB1-207ENST00000577582 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
CACNB1-207ENST00000577582 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
CACNB1-207ENST00000577582 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
CACNB1-207ENST00000577582 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
CACNB1-207ENST00000577582 KIF21BO75037 1637 aa17.22■□□□□ 0.35
CACNB1-207ENST00000577582 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
CACNB1-207ENST00000577582 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
CACNB1-207ENST00000577582 NUP160Q12769 1436 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms