RNA–Protein interactions for RNA: ENST00000577207.2

RN7SL408P-201, Transcript of RNA, 7SL, cytoplasmic 408, pseudogene, humanhuman

BASIC

Gene RN7SL408P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL408P-201ENST00000577207 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
RN7SL408P-201ENST00000577207 ABCC9O60706 1549 aa23.9■■□□□ 1.42
RN7SL408P-201ENST00000577207 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
RN7SL408P-201ENST00000577207 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
RN7SL408P-201ENST00000577207 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
RN7SL408P-201ENST00000577207 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
RN7SL408P-201ENST00000577207 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
RN7SL408P-201ENST00000577207 NACADO15069 1562 aa22.12■■□□□ 1.13
RN7SL408P-201ENST00000577207 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
RN7SL408P-201ENST00000577207 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
RN7SL408P-201ENST00000577207 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
RN7SL408P-201ENST00000577207 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
RN7SL408P-201ENST00000577207 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
RN7SL408P-201ENST00000577207 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
RN7SL408P-201ENST00000577207 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
RN7SL408P-201ENST00000577207 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
RN7SL408P-201ENST00000577207 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
RN7SL408P-201ENST00000577207 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
RN7SL408P-201ENST00000577207 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
RN7SL408P-201ENST00000577207 CUX2O14529 1486 aa20.62■□□□□ 0.89
RN7SL408P-201ENST00000577207 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
RN7SL408P-201ENST00000577207 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
RN7SL408P-201ENST00000577207 NESP48681 1621 aa20.45■□□□□ 0.86
RN7SL408P-201ENST00000577207 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
RN7SL408P-201ENST00000577207 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
RN7SL408P-201ENST00000577207 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
RN7SL408P-201ENST00000577207 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
RN7SL408P-201ENST00000577207 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
RN7SL408P-201ENST00000577207 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
RN7SL408P-201ENST00000577207 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
RN7SL408P-201ENST00000577207 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
RN7SL408P-201ENST00000577207 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
RN7SL408P-201ENST00000577207 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
RN7SL408P-201ENST00000577207 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
RN7SL408P-201ENST00000577207 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
RN7SL408P-201ENST00000577207 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
RN7SL408P-201ENST00000577207 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
RN7SL408P-201ENST00000577207 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
RN7SL408P-201ENST00000577207 WDR62O43379 1518 aa19.81■□□□□ 0.76
RN7SL408P-201ENST00000577207 WIZO95785 1651 aa19.71■□□□□ 0.75
RN7SL408P-201ENST00000577207 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
RN7SL408P-201ENST00000577207 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
RN7SL408P-201ENST00000577207 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
RN7SL408P-201ENST00000577207 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
RN7SL408P-201ENST00000577207 CFTRP13569 1480 aa19.53■□□□□ 0.72
RN7SL408P-201ENST00000577207 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
RN7SL408P-201ENST00000577207 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
RN7SL408P-201ENST00000577207 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
RN7SL408P-201ENST00000577207 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
RN7SL408P-201ENST00000577207 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
RN7SL408P-201ENST00000577207 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
RN7SL408P-201ENST00000577207 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
RN7SL408P-201ENST00000577207 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
RN7SL408P-201ENST00000577207 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
RN7SL408P-201ENST00000577207 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
RN7SL408P-201ENST00000577207 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
RN7SL408P-201ENST00000577207 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
RN7SL408P-201ENST00000577207 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
RN7SL408P-201ENST00000577207 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
RN7SL408P-201ENST00000577207 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.66
RN7SL408P-201ENST00000577207 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
RN7SL408P-201ENST00000577207 FBLN2P98095 1184 aa19.16■□□□□ 0.66
RN7SL408P-201ENST00000577207 CHD1O14646 1710 aa19.15■□□□□ 0.66
RN7SL408P-201ENST00000577207 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
RN7SL408P-201ENST00000577207 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
RN7SL408P-201ENST00000577207 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
RN7SL408P-201ENST00000577207 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
RN7SL408P-201ENST00000577207 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.63
RN7SL408P-201ENST00000577207 ABCC8Q09428 1581 aa19.02■□□□□ 0.63
RN7SL408P-201ENST00000577207 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
RN7SL408P-201ENST00000577207 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
RN7SL408P-201ENST00000577207 SOGA1O94964 1423 aa18.92■□□□□ 0.62
RN7SL408P-201ENST00000577207 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
RN7SL408P-201ENST00000577207 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
RN7SL408P-201ENST00000577207 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
RN7SL408P-201ENST00000577207 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
RN7SL408P-201ENST00000577207 CUX1P39880 1505 aa18.78■□□□□ 0.6
RN7SL408P-201ENST00000577207 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
RN7SL408P-201ENST00000577207 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
RN7SL408P-201ENST00000577207 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
RN7SL408P-201ENST00000577207 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
RN7SL408P-201ENST00000577207 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
RN7SL408P-201ENST00000577207 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
RN7SL408P-201ENST00000577207 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
RN7SL408P-201ENST00000577207 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
RN7SL408P-201ENST00000577207 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
RN7SL408P-201ENST00000577207 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
RN7SL408P-201ENST00000577207 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
RN7SL408P-201ENST00000577207 NUP160Q12769 1436 aa18.49■□□□□ 0.55
RN7SL408P-201ENST00000577207 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
RN7SL408P-201ENST00000577207 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
RN7SL408P-201ENST00000577207 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
RN7SL408P-201ENST00000577207 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
RN7SL408P-201ENST00000577207 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
RN7SL408P-201ENST00000577207 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
RN7SL408P-201ENST00000577207 FAM69CQ0P6D2 419 aa18.38■□□□□ 0.53
RN7SL408P-201ENST00000577207 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
RN7SL408P-201ENST00000577207 JPH4Q96JJ6 628 aa18.33■□□□□ 0.52
RN7SL408P-201ENST00000577207 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
RN7SL408P-201ENST00000577207 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms