RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-222ENST00000577134 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
SPOP-222ENST00000577134 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
SPOP-222ENST00000577134 ABCC9O60706 1549 aa20.08■□□□□ 0.81
SPOP-222ENST00000577134 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
SPOP-222ENST00000577134 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
SPOP-222ENST00000577134 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
SPOP-222ENST00000577134 NACADO15069 1562 aa19.46■□□□□ 0.71
SPOP-222ENST00000577134 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
SPOP-222ENST00000577134 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
SPOP-222ENST00000577134 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
SPOP-222ENST00000577134 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
SPOP-222ENST00000577134 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
SPOP-222ENST00000577134 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPOP-222ENST00000577134 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
SPOP-222ENST00000577134 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
SPOP-222ENST00000577134 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
SPOP-222ENST00000577134 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
SPOP-222ENST00000577134 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
SPOP-222ENST00000577134 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
SPOP-222ENST00000577134 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
SPOP-222ENST00000577134 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
SPOP-222ENST00000577134 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
SPOP-222ENST00000577134 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
SPOP-222ENST00000577134 WIZO95785 1651 aa18.03■□□□□ 0.48
SPOP-222ENST00000577134 SMARCA2P51531 1590 aa18■□□□□ 0.47
SPOP-222ENST00000577134 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
SPOP-222ENST00000577134 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
SPOP-222ENST00000577134 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
SPOP-222ENST00000577134 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
SPOP-222ENST00000577134 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
SPOP-222ENST00000577134 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
SPOP-222ENST00000577134 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
SPOP-222ENST00000577134 NESP48681 1621 aa17.48■□□□□ 0.39
SPOP-222ENST00000577134 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
SPOP-222ENST00000577134 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
SPOP-222ENST00000577134 CFTRP13569 1480 aa17.43■□□□□ 0.38
SPOP-222ENST00000577134 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
SPOP-222ENST00000577134 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
SPOP-222ENST00000577134 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
SPOP-222ENST00000577134 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
SPOP-222ENST00000577134 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
SPOP-222ENST00000577134 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
SPOP-222ENST00000577134 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
SPOP-222ENST00000577134 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
SPOP-222ENST00000577134 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
SPOP-222ENST00000577134 URB2Q14146 1524 aaKnown RBP17.09■□□□□ 0.33
SPOP-222ENST00000577134 WDR62O43379 1518 aa17.06■□□□□ 0.32
SPOP-222ENST00000577134 CUX1P39880 1505 aa17.04■□□□□ 0.32
SPOP-222ENST00000577134 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
SPOP-222ENST00000577134 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
SPOP-222ENST00000577134 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
SPOP-222ENST00000577134 SYNJ1O43426 1573 aa17■□□□□ 0.31
SPOP-222ENST00000577134 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
SPOP-222ENST00000577134 TOP2BQ02880 1626 aa16.96■□□□□ 0.3
SPOP-222ENST00000577134 CUX2O14529 1486 aa16.93■□□□□ 0.3
SPOP-222ENST00000577134 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
SPOP-222ENST00000577134 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
SPOP-222ENST00000577134 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
SPOP-222ENST00000577134 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
SPOP-222ENST00000577134 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
SPOP-222ENST00000577134 SOGA1O94964 1423 aa16.86■□□□□ 0.29
SPOP-222ENST00000577134 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
SPOP-222ENST00000577134 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
SPOP-222ENST00000577134 WDR97A6NE52 1622 aa16.77■□□□□ 0.27
SPOP-222ENST00000577134 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
SPOP-222ENST00000577134 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
SPOP-222ENST00000577134 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
SPOP-222ENST00000577134 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■□□□ 11.4
SPOP-222ENST00000577134 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
SPOP-222ENST00000577134 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
SPOP-222ENST00000577134 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
SPOP-222ENST00000577134 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
SPOP-222ENST00000577134 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
SPOP-222ENST00000577134 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
SPOP-222ENST00000577134 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
SPOP-222ENST00000577134 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
SPOP-222ENST00000577134 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SPOP-222ENST00000577134 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
SPOP-222ENST00000577134 IGF1RP08069 1367 aa16.55■□□□□ 0.24
SPOP-222ENST00000577134 EEA1Q15075 1411 aa16.52■□□□□ 0.23
SPOP-222ENST00000577134 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
SPOP-222ENST00000577134 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
SPOP-222ENST00000577134 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
SPOP-222ENST00000577134 CUL7Q14999 1698 aa16.47■□□□□ 0.23
SPOP-222ENST00000577134 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
SPOP-222ENST00000577134 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
SPOP-222ENST00000577134 FBLN2P98095 1184 aa16.46■□□□□ 0.23
SPOP-222ENST00000577134 CHD1O14646 1710 aa16.45■□□□□ 0.22
SPOP-222ENST00000577134 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
SPOP-222ENST00000577134 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
SPOP-222ENST00000577134 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
SPOP-222ENST00000577134 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
SPOP-222ENST00000577134 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
SPOP-222ENST00000577134 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
SPOP-222ENST00000577134 KIF21BO75037 1637 aa16.35■□□□□ 0.21
SPOP-222ENST00000577134 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
SPOP-222ENST00000577134 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
SPOP-222ENST00000577134 NUP160Q12769 1436 aa16.3■□□□□ 0.2
SPOP-222ENST00000577134 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
SPOP-222ENST00000577134 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms