RNA–Protein interactions for RNA: ENST00000576972.5

EDC4-212, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-212ENST00000576972 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
EDC4-212ENST00000576972 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
EDC4-212ENST00000576972 ABCC9O60706 1549 aa33.38■■■□□ 2.93
EDC4-212ENST00000576972 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
EDC4-212ENST00000576972 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
EDC4-212ENST00000576972 NACADO15069 1562 aa31.77■■■□□ 2.68
EDC4-212ENST00000576972 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
EDC4-212ENST00000576972 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
EDC4-212ENST00000576972 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
EDC4-212ENST00000576972 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
EDC4-212ENST00000576972 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
EDC4-212ENST00000576972 DNAJC5BQ9UF47 199 aa31.1■■■□□ 2.57
EDC4-212ENST00000576972 BICRAQ9NZM4 1560 aa30.9■■■□□ 2.54
EDC4-212ENST00000576972 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
EDC4-212ENST00000576972 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
EDC4-212ENST00000576972 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
EDC4-212ENST00000576972 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
EDC4-212ENST00000576972 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
EDC4-212ENST00000576972 SMARCA4P51532 1647 aa29.41■■■□□ 2.3
EDC4-212ENST00000576972 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
EDC4-212ENST00000576972 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
EDC4-212ENST00000576972 NCAPD3P42695 1498 aa29.32■■■□□ 2.28
EDC4-212ENST00000576972 SMARCA2P51531 1590 aa29.27■■■□□ 2.28
EDC4-212ENST00000576972 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
EDC4-212ENST00000576972 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
EDC4-212ENST00000576972 BAZ1BQ9UIG0 1483 aaKnown RBP29.12■■■□□ 2.25
EDC4-212ENST00000576972 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
EDC4-212ENST00000576972 WIZO95785 1651 aa28.86■■■□□ 2.21
EDC4-212ENST00000576972 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
EDC4-212ENST00000576972 NESP48681 1621 aa28.78■■■□□ 2.2
EDC4-212ENST00000576972 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
EDC4-212ENST00000576972 CUX2O14529 1486 aa28.66■■■□□ 2.18
EDC4-212ENST00000576972 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
EDC4-212ENST00000576972 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
EDC4-212ENST00000576972 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
EDC4-212ENST00000576972 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
EDC4-212ENST00000576972 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
EDC4-212ENST00000576972 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
EDC4-212ENST00000576972 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
EDC4-212ENST00000576972 CFTRP13569 1480 aa28.23■■■□□ 2.11
EDC4-212ENST00000576972 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
EDC4-212ENST00000576972 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
EDC4-212ENST00000576972 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
EDC4-212ENST00000576972 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
EDC4-212ENST00000576972 WDR62O43379 1518 aa28.04■■■□□ 2.08
EDC4-212ENST00000576972 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
EDC4-212ENST00000576972 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
EDC4-212ENST00000576972 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
EDC4-212ENST00000576972 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
EDC4-212ENST00000576972 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
EDC4-212ENST00000576972 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
EDC4-212ENST00000576972 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
EDC4-212ENST00000576972 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
EDC4-212ENST00000576972 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
EDC4-212ENST00000576972 CUX1P39880 1505 aa27.38■■□□□ 1.97
EDC4-212ENST00000576972 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
EDC4-212ENST00000576972 SOGA1O94964 1423 aa27.38■■□□□ 1.97
EDC4-212ENST00000576972 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
EDC4-212ENST00000576972 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
EDC4-212ENST00000576972 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
EDC4-212ENST00000576972 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
EDC4-212ENST00000576972 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.97
EDC4-212ENST00000576972 TDRD9Q8NDG6 1382 aaKnown RBP27.28■■□□□ 1.96
EDC4-212ENST00000576972 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
EDC4-212ENST00000576972 FBLN2P98095 1184 aa27.22■■□□□ 1.95
EDC4-212ENST00000576972 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
EDC4-212ENST00000576972 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
EDC4-212ENST00000576972 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
EDC4-212ENST00000576972 CHD1O14646 1710 aa27.07■■□□□ 1.92
EDC4-212ENST00000576972 RIMBP3CA6NJZ7 1639 aa27.06■■□□□ 1.92
EDC4-212ENST00000576972 RIMBP3BA6NNM3 1639 aa27.06■■□□□ 1.92
EDC4-212ENST00000576972 RIMBP3Q9UFD9 1639 aa27.06■■□□□ 1.92
EDC4-212ENST00000576972 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
EDC4-212ENST00000576972 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
EDC4-212ENST00000576972 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
EDC4-212ENST00000576972 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
EDC4-212ENST00000576972 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
EDC4-212ENST00000576972 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
EDC4-212ENST00000576972 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
EDC4-212ENST00000576972 MAGI1Q96QZ7 1491 aaPredicted RBP26.98■■□□□ 1.91
EDC4-212ENST00000576972 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
EDC4-212ENST00000576972 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
EDC4-212ENST00000576972 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
EDC4-212ENST00000576972 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
EDC4-212ENST00000576972 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
EDC4-212ENST00000576972 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
EDC4-212ENST00000576972 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
EDC4-212ENST00000576972 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
EDC4-212ENST00000576972 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.86
EDC4-212ENST00000576972 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
EDC4-212ENST00000576972 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
EDC4-212ENST00000576972 KIF27Q86VH2 1401 aa26.61■■□□□ 1.85
EDC4-212ENST00000576972 CEP170Q5SW79 1584 aa26.56■■□□□ 1.84
EDC4-212ENST00000576972 NUP160Q12769 1436 aa26.55■■□□□ 1.84
EDC4-212ENST00000576972 IGF1RP08069 1367 aa26.5■■□□□ 1.83
EDC4-212ENST00000576972 CUL7Q14999 1698 aa26.41■■□□□ 1.82
EDC4-212ENST00000576972 ERCC6L2Q5T890 1561 aa26.4■■□□□ 1.82
EDC4-212ENST00000576972 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
EDC4-212ENST00000576972 TRHP20396 242 aaPredicted RBP26.38■■□□□ 1.81
EDC4-212ENST00000576972 JPH4Q96JJ6 628 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms