RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
LCMT1-212ENST00000576625 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
LCMT1-212ENST00000576625 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
LCMT1-212ENST00000576625 ABCC9O60706 1549 aa20.74■□□□□ 0.91
LCMT1-212ENST00000576625 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
LCMT1-212ENST00000576625 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
LCMT1-212ENST00000576625 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
LCMT1-212ENST00000576625 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
LCMT1-212ENST00000576625 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
LCMT1-212ENST00000576625 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
LCMT1-212ENST00000576625 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
LCMT1-212ENST00000576625 NACADO15069 1562 aa19.13■□□□□ 0.65
LCMT1-212ENST00000576625 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
LCMT1-212ENST00000576625 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
LCMT1-212ENST00000576625 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
LCMT1-212ENST00000576625 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
LCMT1-212ENST00000576625 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
LCMT1-212ENST00000576625 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
LCMT1-212ENST00000576625 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
LCMT1-212ENST00000576625 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
LCMT1-212ENST00000576625 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
LCMT1-212ENST00000576625 FOXD1Q16676 465 aa18.35■□□□□ 0.53
LCMT1-212ENST00000576625 CUX2O14529 1486 aa18.25■□□□□ 0.51
LCMT1-212ENST00000576625 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
LCMT1-212ENST00000576625 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
LCMT1-212ENST00000576625 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
LCMT1-212ENST00000576625 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
LCMT1-212ENST00000576625 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
LCMT1-212ENST00000576625 ADRA2BP18089 450 aa17.73■□□□□ 0.43
LCMT1-212ENST00000576625 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
LCMT1-212ENST00000576625 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
LCMT1-212ENST00000576625 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
LCMT1-212ENST00000576625 NESP48681 1621 aa17.63■□□□□ 0.41
LCMT1-212ENST00000576625 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
LCMT1-212ENST00000576625 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
LCMT1-212ENST00000576625 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
LCMT1-212ENST00000576625 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
LCMT1-212ENST00000576625 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
LCMT1-212ENST00000576625 KIF21AQ7Z4S6 1674 aa17.35■□□□□ 0.37
LCMT1-212ENST00000576625 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
LCMT1-212ENST00000576625 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
LCMT1-212ENST00000576625 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
LCMT1-212ENST00000576625 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
LCMT1-212ENST00000576625 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
LCMT1-212ENST00000576625 WDR62O43379 1518 aa17.21■□□□□ 0.35
LCMT1-212ENST00000576625 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
LCMT1-212ENST00000576625 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
LCMT1-212ENST00000576625 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
LCMT1-212ENST00000576625 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
LCMT1-212ENST00000576625 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
LCMT1-212ENST00000576625 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
LCMT1-212ENST00000576625 ARHGEF11O15085 1522 aa17■□□□□ 0.31
LCMT1-212ENST00000576625 MSH5O43196 834 aa16.97■□□□□ 0.31
LCMT1-212ENST00000576625 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
LCMT1-212ENST00000576625 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
LCMT1-212ENST00000576625 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
LCMT1-212ENST00000576625 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
LCMT1-212ENST00000576625 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
LCMT1-212ENST00000576625 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
LCMT1-212ENST00000576625 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
LCMT1-212ENST00000576625 CFTRP13569 1480 aa16.76■□□□□ 0.27
LCMT1-212ENST00000576625 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
LCMT1-212ENST00000576625 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
LCMT1-212ENST00000576625 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
LCMT1-212ENST00000576625 WIZO95785 1651 aa16.63■□□□□ 0.25
LCMT1-212ENST00000576625 CHD1O14646 1710 aa16.58■□□□□ 0.24
LCMT1-212ENST00000576625 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
LCMT1-212ENST00000576625 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
LCMT1-212ENST00000576625 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
LCMT1-212ENST00000576625 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
LCMT1-212ENST00000576625 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.23
LCMT1-212ENST00000576625 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
LCMT1-212ENST00000576625 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
LCMT1-212ENST00000576625 ILDR1Q86SU0 546 aaPredicted RBP16.42■□□□□ 0.22
LCMT1-212ENST00000576625 FBLN2P98095 1184 aa16.39■□□□□ 0.21
LCMT1-212ENST00000576625 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
LCMT1-212ENST00000576625 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
LCMT1-212ENST00000576625 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
LCMT1-212ENST00000576625 DNMBPQ6XZF7 1577 aa16.35■□□□□ 0.21
LCMT1-212ENST00000576625 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
LCMT1-212ENST00000576625 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
LCMT1-212ENST00000576625 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
LCMT1-212ENST00000576625 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
LCMT1-212ENST00000576625 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
LCMT1-212ENST00000576625 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
LCMT1-212ENST00000576625 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
LCMT1-212ENST00000576625 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
LCMT1-212ENST00000576625 KCNA4P22459 653 aa16.2■□□□□ 0.18
LCMT1-212ENST00000576625 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
LCMT1-212ENST00000576625 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
LCMT1-212ENST00000576625 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
LCMT1-212ENST00000576625 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
LCMT1-212ENST00000576625 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
LCMT1-212ENST00000576625 SOGA1O94964 1423 aa16.15■□□□□ 0.18
LCMT1-212ENST00000576625 KIF13AQ9H1H9 1805 aa16.14■□□□□ 0.17
LCMT1-212ENST00000576625 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
LCMT1-212ENST00000576625 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
LCMT1-212ENST00000576625 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
LCMT1-212ENST00000576625 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
LCMT1-212ENST00000576625 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms