RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
SLC12A4-216ENST00000576377 ABCC9O60706 1549 aa37.55■■■■□ 3.6
SLC12A4-216ENST00000576377 DNAJC5BQ9UF47 199 aa36.88■■■■□ 3.49
SLC12A4-216ENST00000576377 CCDC180Q9P1Z9 1646 aa35.7■■■■□ 3.31
SLC12A4-216ENST00000576377 DNAJC5Q9H3Z4 198 aa35.06■■■■□ 3.2
SLC12A4-216ENST00000576377 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
SLC12A4-216ENST00000576377 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.141e-6■■■□□ 14.6
SLC12A4-216ENST00000576377 UNC13AQ9UPW8 1703 aa34.19■■■■□ 3.06
SLC12A4-216ENST00000576377 NACADO15069 1562 aa34.14■■■■□ 3.06
SLC12A4-216ENST00000576377 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
SLC12A4-216ENST00000576377 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
SLC12A4-216ENST00000576377 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
SLC12A4-216ENST00000576377 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
SLC12A4-216ENST00000576377 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
SLC12A4-216ENST00000576377 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
SLC12A4-216ENST00000576377 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
SLC12A4-216ENST00000576377 CUX2O14529 1486 aa33.02■■■□□ 2.88
SLC12A4-216ENST00000576377 TRIM41Q8WV44 630 aa32.82■■■□□ 2.84
SLC12A4-216ENST00000576377 SCRIBQ14160 1630 aa32.51■■■□□ 2.8
SLC12A4-216ENST00000576377 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
SLC12A4-216ENST00000576377 DCAF1Q9Y4B6 1507 aa31.96■■■□□ 2.71
SLC12A4-216ENST00000576377 ZCCHC6Q5VYS8 1495 aaKnown RBP31.89■■■□□ 2.7
SLC12A4-216ENST00000576377 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
SLC12A4-216ENST00000576377 NESP48681 1621 aa31.78■■■□□ 2.68
SLC12A4-216ENST00000576377 NCAPD3P42695 1498 aa31.55■■■□□ 2.64
SLC12A4-216ENST00000576377 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
SLC12A4-216ENST00000576377 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
SLC12A4-216ENST00000576377 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
SLC12A4-216ENST00000576377 ATAD2BQ9ULI0 1458 aa31.24■■■□□ 2.59
SLC12A4-216ENST00000576377 AEBP2Q6ZN18 517 aaPredicted RBP31.22■■■□□ 2.59
SLC12A4-216ENST00000576377 HMGXB3Q12766 1538 aa31.18■■■□□ 2.58
SLC12A4-216ENST00000576377 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
SLC12A4-216ENST00000576377 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
SLC12A4-216ENST00000576377 RIMBP3CA6NJZ7 1639 aa31.1■■■□□ 2.57
SLC12A4-216ENST00000576377 RIMBP3BA6NNM3 1639 aa31.1■■■□□ 2.57
SLC12A4-216ENST00000576377 RIMBP3Q9UFD9 1639 aa31.1■■■□□ 2.57
SLC12A4-216ENST00000576377 PDS5BQ9NTI5 1447 aa30.96■■■□□ 2.55
SLC12A4-216ENST00000576377 WDR62O43379 1518 aa30.91■■■□□ 2.54
SLC12A4-216ENST00000576377 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.54
SLC12A4-216ENST00000576377 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.53
SLC12A4-216ENST00000576377 TRHP20396 242 aaPredicted RBP30.82■■■□□ 2.52
SLC12A4-216ENST00000576377 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
SLC12A4-216ENST00000576377 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
SLC12A4-216ENST00000576377 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
SLC12A4-216ENST00000576377 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
SLC12A4-216ENST00000576377 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
SLC12A4-216ENST00000576377 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
SLC12A4-216ENST00000576377 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
SLC12A4-216ENST00000576377 ILDR1Q86SU0 546 aaPredicted RBP30.35■■■□□ 2.45
SLC12A4-216ENST00000576377 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
SLC12A4-216ENST00000576377 URB2Q14146 1524 aaKnown RBP30.13■■■□□ 2.41
SLC12A4-216ENST00000576377 ZNF608Q9ULD9 1512 aaPredicted RBP30.08■■■□□ 2.41
SLC12A4-216ENST00000576377 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
SLC12A4-216ENST00000576377 CHD1O14646 1710 aa29.95■■■□□ 2.38
SLC12A4-216ENST00000576377 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
SLC12A4-216ENST00000576377 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
SLC12A4-216ENST00000576377 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
SLC12A4-216ENST00000576377 CFTRP13569 1480 aa29.8■■■□□ 2.36
SLC12A4-216ENST00000576377 FBLN2P98095 1184 aa29.61■■■□□ 2.33
SLC12A4-216ENST00000576377 WIZO95785 1651 aa29.59■■■□□ 2.33
SLC12A4-216ENST00000576377 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
SLC12A4-216ENST00000576377 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.327e-7■■■■■ 31.1
SLC12A4-216ENST00000576377 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
SLC12A4-216ENST00000576377 KDM4FA0A1W2PPD8 638 aa29.39■■■□□ 2.3
SLC12A4-216ENST00000576377 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
SLC12A4-216ENST00000576377 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
SLC12A4-216ENST00000576377 GAPVD1Q14C86 1478 aa29.32■■■□□ 2.28
SLC12A4-216ENST00000576377 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
SLC12A4-216ENST00000576377 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
SLC12A4-216ENST00000576377 SNAPC4Q5SXM2 1469 aa29.18■■■□□ 2.26
SLC12A4-216ENST00000576377 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
SLC12A4-216ENST00000576377 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
SLC12A4-216ENST00000576377 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
SLC12A4-216ENST00000576377 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
SLC12A4-216ENST00000576377 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
SLC12A4-216ENST00000576377 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
SLC12A4-216ENST00000576377 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
SLC12A4-216ENST00000576377 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
SLC12A4-216ENST00000576377 HECW2Q9P2P5 1572 aa28.96■■■□□ 2.23
SLC12A4-216ENST00000576377 MAGI1Q96QZ7 1491 aaPredicted RBP28.95■■■□□ 2.22
SLC12A4-216ENST00000576377 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
SLC12A4-216ENST00000576377 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
SLC12A4-216ENST00000576377 KDM6BO15054 1643 aa28.86■■■□□ 2.21
SLC12A4-216ENST00000576377 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
SLC12A4-216ENST00000576377 SOGA1O94964 1423 aa28.79■■■□□ 2.2
SLC12A4-216ENST00000576377 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
SLC12A4-216ENST00000576377 FAM69CQ0P6D2 419 aa28.74■■■□□ 2.19
SLC12A4-216ENST00000576377 ADGRL1O94910 1474 aa28.73■■■□□ 2.19
SLC12A4-216ENST00000576377 LMTK3Q96Q04 1460 aa28.73■■■□□ 2.19
SLC12A4-216ENST00000576377 ABCC10Q5T3U5 1492 aa28.72■■■□□ 2.19
SLC12A4-216ENST00000576377 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
SLC12A4-216ENST00000576377 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
SLC12A4-216ENST00000576377 DIP2BQ9P265 1576 aa28.67■■■□□ 2.18
SLC12A4-216ENST00000576377 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
SLC12A4-216ENST00000576377 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
SLC12A4-216ENST00000576377 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
SLC12A4-216ENST00000576377 SHROOM2Q13796 1616 aa28.53■■■□□ 2.16
SLC12A4-216ENST00000576377 MAPKBP1O60336 1514 aa28.49■■■□□ 2.15
SLC12A4-216ENST00000576377 SOCS7O14512 581 aa28.49■■■□□ 2.15
SLC12A4-216ENST00000576377 ILDR2Q71H61 639 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms