RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
SPNS3-206ENST00000576069 CCDC180Q9P1Z9 1646 aa41.53■■■■■ 4.24
SPNS3-206ENST00000576069 ABCC9O60706 1549 aa40.57■■■■■ 4.09
SPNS3-206ENST00000576069 DCAF8L2P0C7V8 631 aa39.13■■■■□ 3.85
SPNS3-206ENST00000576069 NACADO15069 1562 aa39.09■■■■□ 3.85
SPNS3-206ENST00000576069 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
SPNS3-206ENST00000576069 ZCCHC6Q5VYS8 1495 aaKnown RBP39.01■■■■□ 3.84
SPNS3-206ENST00000576069 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
SPNS3-206ENST00000576069 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
SPNS3-206ENST00000576069 UNC13AQ9UPW8 1703 aa38.08■■■■□ 3.69
SPNS3-206ENST00000576069 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.67
SPNS3-206ENST00000576069 BICRAQ9NZM4 1560 aa37.88■■■■□ 3.65
SPNS3-206ENST00000576069 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
SPNS3-206ENST00000576069 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
SPNS3-206ENST00000576069 DNAJC5BQ9UF47 199 aa37.22■■■■□ 3.55
SPNS3-206ENST00000576069 EIF4G1Q04637 1599 aaKnown RBP36.88■■■■□ 3.49
SPNS3-206ENST00000576069 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
SPNS3-206ENST00000576069 CECR2Q9BXF3 1484 aa36.47■■■■□ 3.43
SPNS3-206ENST00000576069 BAZ1AQ9NRL2 1556 aaPredicted RBP36.29■■■■□ 3.4
SPNS3-206ENST00000576069 SMARCA4P51532 1647 aa36.27■■■■□ 3.4
SPNS3-206ENST00000576069 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
SPNS3-206ENST00000576069 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
SPNS3-206ENST00000576069 MROH2BQ7Z745 1585 aa36.07■■■■□ 3.37
SPNS3-206ENST00000576069 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
SPNS3-206ENST00000576069 PEG3Q9GZU2 1588 aa35.96■■■■□ 3.35
SPNS3-206ENST00000576069 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
SPNS3-206ENST00000576069 BAZ1BQ9UIG0 1483 aaKnown RBP35.8■■■■□ 3.32
SPNS3-206ENST00000576069 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
SPNS3-206ENST00000576069 WIZO95785 1651 aa35.65■■■■□ 3.3
SPNS3-206ENST00000576069 TOP2AP11388 1531 aaKnown RBP35.31■■■■□ 3.24
SPNS3-206ENST00000576069 NESP48681 1621 aa35.13■■■■□ 3.21
SPNS3-206ENST00000576069 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
SPNS3-206ENST00000576069 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
SPNS3-206ENST00000576069 ERCC6Q03468 1493 aa34.98■■■■□ 3.19
SPNS3-206ENST00000576069 CCDC88BA6NC98 1476 aa34.94■■■■□ 3.18
SPNS3-206ENST00000576069 PDS5BQ9NTI5 1447 aa34.91■■■■□ 3.18
SPNS3-206ENST00000576069 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
SPNS3-206ENST00000576069 CFTRP13569 1480 aa34.86■■■■□ 3.17
SPNS3-206ENST00000576069 KIF21AQ7Z4S6 1674 aa34.65■■■■□ 3.14
SPNS3-206ENST00000576069 FANCD2Q9BXW9 1451 aa34.62■■■■□ 3.13
SPNS3-206ENST00000576069 CUX2O14529 1486 aa34.6■■■■□ 3.13
SPNS3-206ENST00000576069 CEP164Q9UPV0 1460 aa34.55■■■■□ 3.12
SPNS3-206ENST00000576069 THOC2Q8NI27 1593 aaKnown RBP34.54■■■■□ 3.12
SPNS3-206ENST00000576069 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
SPNS3-206ENST00000576069 PRDM2Q13029 1718 aa34.45■■■■□ 3.11
SPNS3-206ENST00000576069 WDR62O43379 1518 aa34.35■■■■□ 3.09
SPNS3-206ENST00000576069 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
SPNS3-206ENST00000576069 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
SPNS3-206ENST00000576069 TOPBP1Q92547 1522 aa34.06■■■■□ 3.04
SPNS3-206ENST00000576069 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
SPNS3-206ENST00000576069 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
SPNS3-206ENST00000576069 CUX1P39880 1505 aa33.83■■■■□ 3.01
SPNS3-206ENST00000576069 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
SPNS3-206ENST00000576069 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
SPNS3-206ENST00000576069 SOGA1O94964 1423 aa33.7■■■□□ 2.98
SPNS3-206ENST00000576069 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
SPNS3-206ENST00000576069 TARBP1Q13395 1621 aaKnown RBP33.66■■■□□ 2.98
SPNS3-206ENST00000576069 ZNF608Q9ULD9 1512 aaPredicted RBP33.65■■■□□ 2.98
SPNS3-206ENST00000576069 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
SPNS3-206ENST00000576069 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
SPNS3-206ENST00000576069 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
SPNS3-206ENST00000576069 SYNJ1O43426 1573 aa33.53■■■□□ 2.96
SPNS3-206ENST00000576069 AQRO60306 1485 aaKnown RBP eCLIP33.5■■■□□ 2.95
SPNS3-206ENST00000576069 DNAJC5Q9H3Z4 198 aa33.49■■■□□ 2.95
SPNS3-206ENST00000576069 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
SPNS3-206ENST00000576069 EIF4G3O43432 1585 aaKnown RBP33.47■■■□□ 2.95
SPNS3-206ENST00000576069 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
SPNS3-206ENST00000576069 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
SPNS3-206ENST00000576069 GAPVD1Q14C86 1478 aa33.28■■■□□ 2.92
SPNS3-206ENST00000576069 GRIN2BQ13224 1484 aa33.27■■■□□ 2.92
SPNS3-206ENST00000576069 OSCARQ8IYS5 282 aa33.26■■■□□ 2.91
SPNS3-206ENST00000576069 ABCA5Q8WWZ7 1642 aa33.21■■■□□ 2.91
SPNS3-206ENST00000576069 SNAPC4Q5SXM2 1469 aa33.17■■■□□ 2.9
SPNS3-206ENST00000576069 MAGI1Q96QZ7 1491 aaPredicted RBP33.16■■■□□ 2.9
SPNS3-206ENST00000576069 FBLN2P98095 1184 aa33.11■■■□□ 2.89
SPNS3-206ENST00000576069 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
SPNS3-206ENST00000576069 CHMP7Q8WUX9 453 aaPredicted RBP33.07■■■□□ 2.88
SPNS3-206ENST00000576069 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
SPNS3-206ENST00000576069 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
SPNS3-206ENST00000576069 TRIM41Q8WV44 630 aa33.01■■■□□ 2.87
SPNS3-206ENST00000576069 KIF27Q86VH2 1401 aa33■■■□□ 2.87
SPNS3-206ENST00000576069 CHD1O14646 1710 aa32.99■■■□□ 2.87
SPNS3-206ENST00000576069 FHAD1B1AJZ9 1412 aa32.92■■■□□ 2.86
SPNS3-206ENST00000576069 IGF1RP08069 1367 aa32.88■■■□□ 2.85
SPNS3-206ENST00000576069 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
SPNS3-206ENST00000576069 GRIN2AQ12879 1464 aa32.82■■■□□ 2.84
SPNS3-206ENST00000576069 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
SPNS3-206ENST00000576069 NUP160Q12769 1436 aa32.69■■■□□ 2.82
SPNS3-206ENST00000576069 CUL7Q14999 1698 aa32.69■■■□□ 2.82
SPNS3-206ENST00000576069 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
SPNS3-206ENST00000576069 RUSC2Q8N2Y8 1516 aa32.67■■■□□ 2.82
SPNS3-206ENST00000576069 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
SPNS3-206ENST00000576069 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
SPNS3-206ENST00000576069 CEP170Q5SW79 1584 aa32.61■■■□□ 2.81
SPNS3-206ENST00000576069 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
SPNS3-206ENST00000576069 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
SPNS3-206ENST00000576069 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
SPNS3-206ENST00000576069 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
SPNS3-206ENST00000576069 EEA1Q15075 1411 aa32.44■■■□□ 2.78
SPNS3-206ENST00000576069 KIAA0586Q9BVV6 1533 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms