RNA–Protein interactions for RNA: ENST00000575948.1

ZNF200-209, Transcript of zinc finger protein 200, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF200, Length 1,350 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF200-209ENST00000575948 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
ZNF200-209ENST00000575948 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
ZNF200-209ENST00000575948 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
ZNF200-209ENST00000575948 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
ZNF200-209ENST00000575948 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
ZNF200-209ENST00000575948 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
ZNF200-209ENST00000575948 ABCC9O60706 1549 aa22.56■■□□□ 1.2
ZNF200-209ENST00000575948 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
ZNF200-209ENST00000575948 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
ZNF200-209ENST00000575948 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
ZNF200-209ENST00000575948 NACADO15069 1562 aa21.98■■□□□ 1.11
ZNF200-209ENST00000575948 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
ZNF200-209ENST00000575948 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
ZNF200-209ENST00000575948 FOXD1Q16676 465 aa21.51■■□□□ 1.03
ZNF200-209ENST00000575948 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
ZNF200-209ENST00000575948 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
ZNF200-209ENST00000575948 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
ZNF200-209ENST00000575948 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
ZNF200-209ENST00000575948 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
ZNF200-209ENST00000575948 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
ZNF200-209ENST00000575948 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
ZNF200-209ENST00000575948 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
ZNF200-209ENST00000575948 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
ZNF200-209ENST00000575948 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
ZNF200-209ENST00000575948 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
ZNF200-209ENST00000575948 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
ZNF200-209ENST00000575948 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
ZNF200-209ENST00000575948 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
ZNF200-209ENST00000575948 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
ZNF200-209ENST00000575948 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
ZNF200-209ENST00000575948 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
ZNF200-209ENST00000575948 WIZO95785 1651 aa20.27■□□□□ 0.84
ZNF200-209ENST00000575948 NCAPD3P42695 1498 aa20.25■□□□□ 0.83
ZNF200-209ENST00000575948 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
ZNF200-209ENST00000575948 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
ZNF200-209ENST00000575948 ADRA2BP18089 450 aa20.17■□□□□ 0.82
ZNF200-209ENST00000575948 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
ZNF200-209ENST00000575948 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
ZNF200-209ENST00000575948 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.8
ZNF200-209ENST00000575948 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
ZNF200-209ENST00000575948 MSH5O43196 834 aa19.99■□□□□ 0.79
ZNF200-209ENST00000575948 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
ZNF200-209ENST00000575948 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
ZNF200-209ENST00000575948 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
ZNF200-209ENST00000575948 CFTRP13569 1480 aa19.65■□□□□ 0.74
ZNF200-209ENST00000575948 NESP48681 1621 aa19.64■□□□□ 0.73
ZNF200-209ENST00000575948 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
ZNF200-209ENST00000575948 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
ZNF200-209ENST00000575948 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
ZNF200-209ENST00000575948 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
ZNF200-209ENST00000575948 FANCD2Q9BXW9 1451 aa19.45■□□□□ 0.7
ZNF200-209ENST00000575948 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
ZNF200-209ENST00000575948 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
ZNF200-209ENST00000575948 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.68
ZNF200-209ENST00000575948 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
ZNF200-209ENST00000575948 WDR62O43379 1518 aa19.25■□□□□ 0.67
ZNF200-209ENST00000575948 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
ZNF200-209ENST00000575948 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
ZNF200-209ENST00000575948 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
ZNF200-209ENST00000575948 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
ZNF200-209ENST00000575948 CUX1P39880 1505 aa19.16■□□□□ 0.66
ZNF200-209ENST00000575948 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
ZNF200-209ENST00000575948 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
ZNF200-209ENST00000575948 CUX2O14529 1486 aa19.13■□□□□ 0.65
ZNF200-209ENST00000575948 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
ZNF200-209ENST00000575948 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
ZNF200-209ENST00000575948 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
ZNF200-209ENST00000575948 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
ZNF200-209ENST00000575948 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
ZNF200-209ENST00000575948 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
ZNF200-209ENST00000575948 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
ZNF200-209ENST00000575948 SOGA1O94964 1423 aa18.94■□□□□ 0.62
ZNF200-209ENST00000575948 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
ZNF200-209ENST00000575948 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
ZNF200-209ENST00000575948 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.62
ZNF200-209ENST00000575948 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
ZNF200-209ENST00000575948 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.61
ZNF200-209ENST00000575948 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
ZNF200-209ENST00000575948 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
ZNF200-209ENST00000575948 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
ZNF200-209ENST00000575948 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
ZNF200-209ENST00000575948 GAPVD1Q14C86 1478 aa18.75■□□□□ 0.59
ZNF200-209ENST00000575948 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
ZNF200-209ENST00000575948 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
ZNF200-209ENST00000575948 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
ZNF200-209ENST00000575948 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
ZNF200-209ENST00000575948 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
ZNF200-209ENST00000575948 EEA1Q15075 1411 aa18.63■□□□□ 0.57
ZNF200-209ENST00000575948 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
ZNF200-209ENST00000575948 CUL7Q14999 1698 aa18.61■□□□□ 0.57
ZNF200-209ENST00000575948 IGF1RP08069 1367 aa18.6■□□□□ 0.57
ZNF200-209ENST00000575948 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
ZNF200-209ENST00000575948 CHD1O14646 1710 aa18.55■□□□□ 0.56
ZNF200-209ENST00000575948 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
ZNF200-209ENST00000575948 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
ZNF200-209ENST00000575948 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
ZNF200-209ENST00000575948 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
ZNF200-209ENST00000575948 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
ZNF200-209ENST00000575948 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
ZNF200-209ENST00000575948 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms