RNA–Protein interactions for RNA: ENST00000575927.1

CYCSP40-201, Transcript of cytochrome c, somatic pseudogene 40, humanhuman

BASIC

Gene CYCSP40, Length 294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP40-201ENST00000575927 NISCHQ9Y2I1 1504 aa10.52□□□□□ -0.73
CYCSP40-201ENST00000575927 CCDC180Q9P1Z9 1646 aa9.16□□□□□ -0.94
CYCSP40-201ENST00000575927 ZCCHC6Q5VYS8 1495 aaKnown RBP8.89□□□□□ -0.99
CYCSP40-201ENST00000575927 SHROOM4Q9ULL8 1493 aa8.72□□□□□ -1.01
CYCSP40-201ENST00000575927 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
CYCSP40-201ENST00000575927 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
CYCSP40-201ENST00000575927 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
CYCSP40-201ENST00000575927 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
CYCSP40-201ENST00000575927 SCRIBQ14160 1630 aa8.41□□□□□ -1.06
CYCSP40-201ENST00000575927 NACADO15069 1562 aa8.41□□□□□ -1.06
CYCSP40-201ENST00000575927 ABCC9O60706 1549 aa8.4□□□□□ -1.06
CYCSP40-201ENST00000575927 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
CYCSP40-201ENST00000575927 CHIC1Q5VXU3 224 aa8.24□□□□□ -1.09
CYCSP40-201ENST00000575927 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
CYCSP40-201ENST00000575927 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
CYCSP40-201ENST00000575927 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CYCSP40-201ENST00000575927 CECR2Q9BXF3 1484 aa8.13□□□□□ -1.11
CYCSP40-201ENST00000575927 WIZO95785 1651 aa8.13□□□□□ -1.11
CYCSP40-201ENST00000575927 BAZ1AQ9NRL2 1556 aaPredicted RBP8.13□□□□□ -1.11
CYCSP40-201ENST00000575927 SMARCA4P51532 1647 aa8.08□□□□□ -1.12
CYCSP40-201ENST00000575927 TOP2AP11388 1531 aaKnown RBP8.03□□□□□ -1.12
CYCSP40-201ENST00000575927 BICRAQ9NZM4 1560 aa8.03□□□□□ -1.12
CYCSP40-201ENST00000575927 EIF4G1Q04637 1599 aaKnown RBP8.01□□□□□ -1.13
CYCSP40-201ENST00000575927 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
CYCSP40-201ENST00000575927 TRIM41Q8WV44 630 aa7.96□□□□□ -1.14
CYCSP40-201ENST00000575927 PEG3Q9GZU2 1588 aa7.94□□□□□ -1.14
CYCSP40-201ENST00000575927 LOC105371045A0A1W2PR82 267 aa7.92□□□□□ -1.14
CYCSP40-201ENST00000575927 CCDC88BA6NC98 1476 aa7.91□□□□□ -1.14
CYCSP40-201ENST00000575927 PABPN1Q86U42 306 aaKnown RBP eCLIP7.88□□□□□ -1.15
CYCSP40-201ENST00000575927 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
CYCSP40-201ENST00000575927 ATAD2BQ9ULI0 1458 aa7.83□□□□□ -1.16
CYCSP40-201ENST00000575927 FAM9AQ8IZU1 332 aaPredicted RBP7.83□□□□□ -1.16
CYCSP40-201ENST00000575927 BAZ1BQ9UIG0 1483 aaKnown RBP7.82□□□□□ -1.16
CYCSP40-201ENST00000575927 PCGF6Q9BYE7 350 aa7.82□□□□□ -1.16
CYCSP40-201ENST00000575927 HRCP23327 699 aa7.8□□□□□ -1.16
CYCSP40-201ENST00000575927 HMGXB3Q12766 1538 aa7.78□□□□□ -1.16
CYCSP40-201ENST00000575927 EEA1Q15075 1411 aa7.78□□□□□ -1.16
CYCSP40-201ENST00000575927 TRIM26Q12899 539 aaPredicted RBP7.77□□□□□ -1.17
CYCSP40-201ENST00000575927 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CYCSP40-201ENST00000575927 WRNQ14191 1432 aaPredicted RBP eCLIP7.75□□□□□ -1.17
CYCSP40-201ENST00000575927 SYNJ1O43426 1573 aa7.75□□□□□ -1.17
CYCSP40-201ENST00000575927 BIVM-ERCC5R4GMW8 1640 aa7.72□□□□□ -1.17
CYCSP40-201ENST00000575927 KIF21BO75037 1637 aa7.71□□□□□ -1.17
CYCSP40-201ENST00000575927 NCAPD3P42695 1498 aa7.71□□□□□ -1.18
CYCSP40-201ENST00000575927 EHMT2Q96KQ7 1210 aa7.71□□□□□ -1.18
CYCSP40-201ENST00000575927 SOGA1O94964 1423 aa7.7□□□□□ -1.18
CYCSP40-201ENST00000575927 TOP2BQ02880 1626 aa7.7□□□□□ -1.18
CYCSP40-201ENST00000575927 GOLGA3Q08378 1498 aa7.69□□□□□ -1.18
CYCSP40-201ENST00000575927 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
CYCSP40-201ENST00000575927 TNIKQ9UKE5 1360 aa7.68□□□□□ -1.18
CYCSP40-201ENST00000575927 CSRNP3Q8WYN3 585 aa7.66□□□□□ -1.18
CYCSP40-201ENST00000575927 CEP162Q5TB80 1403 aa7.66□□□□□ -1.18
CYCSP40-201ENST00000575927 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
CYCSP40-201ENST00000575927 CC2D2AQ9P2K1 1620 aa7.61□□□□□ -1.19
CYCSP40-201ENST00000575927 ZEB1P37275 1124 aaPredicted RBP7.61□□□□□ -1.19
CYCSP40-201ENST00000575927 CFTRP13569 1480 aa7.61□□□□□ -1.19
CYCSP40-201ENST00000575927 UBTFP17480 764 aaKnown RBP7.6□□□□□ -1.19
CYCSP40-201ENST00000575927 CUX1P39880 1505 aa7.6□□□□□ -1.19
CYCSP40-201ENST00000575927 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
CYCSP40-201ENST00000575927 PPARGC1BQ86YN6 1023 aaKnown RBP7.57□□□□□ -1.2
CYCSP40-201ENST00000575927 RAPGEF2Q9Y4G8 1499 aa7.55□□□□□ -1.2
CYCSP40-201ENST00000575927 CLIP1P30622 1438 aa7.55□□□□□ -1.2
CYCSP40-201ENST00000575927 KIF27Q86VH2 1401 aa7.53□□□□□ -1.2
CYCSP40-201ENST00000575927 PRXQ9BXM0 1461 aa7.53□□□□□ -1.2
CYCSP40-201ENST00000575927 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.2
CYCSP40-201ENST00000575927 CADPSQ9ULU8 1353 aa7.52□□□□□ -1.21
CYCSP40-201ENST00000575927 DNMBPQ6XZF7 1577 aa7.49□□□□□ -1.21
CYCSP40-201ENST00000575927 FGD5Q6ZNL6 1462 aa7.49□□□□□ -1.21
CYCSP40-201ENST00000575927 CUX2O14529 1486 aa7.47□□□□□ -1.21
CYCSP40-201ENST00000575927 FANCD2Q9BXW9 1451 aa7.47□□□□□ -1.21
CYCSP40-201ENST00000575927 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.21
CYCSP40-201ENST00000575927 ARAP1Q96P48 1450 aa7.46□□□□□ -1.22
CYCSP40-201ENST00000575927 TTBK1Q5TCY1 1321 aaPredicted RBP7.46□□□□□ -1.22
CYCSP40-201ENST00000575927 WDR97A6NE52 1622 aa7.45□□□□□ -1.22
CYCSP40-201ENST00000575927 APLP2Q06481 763 aa7.45□□□□□ -1.22
CYCSP40-201ENST00000575927 CUL7Q14999 1698 aa7.44□□□□□ -1.22
CYCSP40-201ENST00000575927 CTTNBP2Q8WZ74 1663 aa7.44□□□□□ -1.22
CYCSP40-201ENST00000575927 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
CYCSP40-201ENST00000575927 TOPBP1Q92547 1522 aa7.43□□□□□ -1.22
CYCSP40-201ENST00000575927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.42□□□□□ -1.22
CYCSP40-201ENST00000575927 ABCA10Q8WWZ4 1543 aa7.42□□□□□ -1.22
CYCSP40-201ENST00000575927 NESP48681 1621 aa7.41□□□□□ -1.22
CYCSP40-201ENST00000575927 KIF21AQ7Z4S6 1674 aa7.41□□□□□ -1.22
CYCSP40-201ENST00000575927 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
CYCSP40-201ENST00000575927 ARHGAP35Q9NRY4 1499 aa7.41□□□□□ -1.22
CYCSP40-201ENST00000575927 IGF1RP08069 1367 aa7.4□□□□□ -1.22
CYCSP40-201ENST00000575927 POLA1P09884 1462 aaPredicted RBP7.4□□□□□ -1.22
CYCSP40-201ENST00000575927 CFAP43Q8NDM7 1665 aa7.39□□□□□ -1.23
CYCSP40-201ENST00000575927 CARMIL1Q5VZK9 1371 aa7.39□□□□□ -1.23
CYCSP40-201ENST00000575927 ABCA5Q8WWZ7 1642 aa7.38□□□□□ -1.23
CYCSP40-201ENST00000575927 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
CYCSP40-201ENST00000575927 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
CYCSP40-201ENST00000575927 TIAM1Q13009 1591 aa7.37□□□□□ -1.23
CYCSP40-201ENST00000575927 EFCAB5A4FU69 1503 aa7.37□□□□□ -1.23
CYCSP40-201ENST00000575927 MAP3K1Q13233 1512 aa7.37□□□□□ -1.23
CYCSP40-201ENST00000575927 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
CYCSP40-201ENST00000575927 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
CYCSP40-201ENST00000575927 PCF11O94913 1555 aaKnown RBP7.34□□□□□ -1.23
CYCSP40-201ENST00000575927 HNRNPUL2Q1KMD3 747 aaKnown RBP7.34□□□□□ -1.23
CYCSP40-201ENST00000575927 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms