RNA–Protein interactions for RNA: ENST00000575919.1

SLC52A1-205, Transcript of solute carrier family 52 member 1, humanhuman

TSL 5

Gene SLC52A1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-205ENST00000575919 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
SLC52A1-205ENST00000575919 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
SLC52A1-205ENST00000575919 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
SLC52A1-205ENST00000575919 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
SLC52A1-205ENST00000575919 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
SLC52A1-205ENST00000575919 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
SLC52A1-205ENST00000575919 ABCC9O60706 1549 aa26.8■■□□□ 1.88
SLC52A1-205ENST00000575919 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
SLC52A1-205ENST00000575919 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
SLC52A1-205ENST00000575919 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
SLC52A1-205ENST00000575919 NACADO15069 1562 aa26.29■■□□□ 1.8
SLC52A1-205ENST00000575919 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
SLC52A1-205ENST00000575919 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
SLC52A1-205ENST00000575919 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
SLC52A1-205ENST00000575919 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
SLC52A1-205ENST00000575919 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
SLC52A1-205ENST00000575919 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
SLC52A1-205ENST00000575919 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
SLC52A1-205ENST00000575919 WIZO95785 1651 aa25.31■■□□□ 1.64
SLC52A1-205ENST00000575919 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
SLC52A1-205ENST00000575919 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
SLC52A1-205ENST00000575919 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
SLC52A1-205ENST00000575919 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.57
SLC52A1-205ENST00000575919 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
SLC52A1-205ENST00000575919 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
SLC52A1-205ENST00000575919 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
SLC52A1-205ENST00000575919 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
SLC52A1-205ENST00000575919 PEG3Q9GZU2 1588 aa24.68■■□□□ 1.54
SLC52A1-205ENST00000575919 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
SLC52A1-205ENST00000575919 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.53
SLC52A1-205ENST00000575919 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.53
SLC52A1-205ENST00000575919 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
SLC52A1-205ENST00000575919 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
SLC52A1-205ENST00000575919 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.51
SLC52A1-205ENST00000575919 NCAPD3P42695 1498 aa24.33■■□□□ 1.48
SLC52A1-205ENST00000575919 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
SLC52A1-205ENST00000575919 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
SLC52A1-205ENST00000575919 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
SLC52A1-205ENST00000575919 SOGA1O94964 1423 aa24.11■■□□□ 1.45
SLC52A1-205ENST00000575919 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
SLC52A1-205ENST00000575919 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
SLC52A1-205ENST00000575919 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
SLC52A1-205ENST00000575919 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
SLC52A1-205ENST00000575919 CFTRP13569 1480 aa23.93■■□□□ 1.42
SLC52A1-205ENST00000575919 EEA1Q15075 1411 aa23.84■■□□□ 1.41
SLC52A1-205ENST00000575919 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
SLC52A1-205ENST00000575919 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
SLC52A1-205ENST00000575919 HRCP23327 699 aa23.81■■□□□ 1.4
SLC52A1-205ENST00000575919 UBTFP17480 764 aaKnown RBP23.8■■□□□ 1.4
SLC52A1-205ENST00000575919 CUX1P39880 1505 aa23.76■■□□□ 1.39
SLC52A1-205ENST00000575919 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
SLC52A1-205ENST00000575919 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
SLC52A1-205ENST00000575919 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
SLC52A1-205ENST00000575919 TRIM26Q12899 539 aaPredicted RBP23.69■■□□□ 1.38
SLC52A1-205ENST00000575919 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
SLC52A1-205ENST00000575919 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
SLC52A1-205ENST00000575919 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
SLC52A1-205ENST00000575919 NESP48681 1621 aa23.65■■□□□ 1.38
SLC52A1-205ENST00000575919 CEP162Q5TB80 1403 aa23.64■■□□□ 1.38
SLC52A1-205ENST00000575919 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
SLC52A1-205ENST00000575919 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
SLC52A1-205ENST00000575919 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
SLC52A1-205ENST00000575919 KIF21BO75037 1637 aa23.55■■□□□ 1.36
SLC52A1-205ENST00000575919 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
SLC52A1-205ENST00000575919 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
SLC52A1-205ENST00000575919 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
SLC52A1-205ENST00000575919 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
SLC52A1-205ENST00000575919 CUX2O14529 1486 aa23.42■■□□□ 1.34
SLC52A1-205ENST00000575919 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
SLC52A1-205ENST00000575919 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
SLC52A1-205ENST00000575919 CLIP1P30622 1438 aa23.37■■□□□ 1.33
SLC52A1-205ENST00000575919 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
SLC52A1-205ENST00000575919 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
SLC52A1-205ENST00000575919 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.32
SLC52A1-205ENST00000575919 IGF1RP08069 1367 aa23.31■■□□□ 1.32
SLC52A1-205ENST00000575919 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
SLC52A1-205ENST00000575919 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SLC52A1-205ENST00000575919 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
SLC52A1-205ENST00000575919 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
SLC52A1-205ENST00000575919 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
SLC52A1-205ENST00000575919 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
SLC52A1-205ENST00000575919 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
SLC52A1-205ENST00000575919 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
SLC52A1-205ENST00000575919 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
SLC52A1-205ENST00000575919 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
SLC52A1-205ENST00000575919 APLP2Q06481 763 aa23.09■■□□□ 1.29
SLC52A1-205ENST00000575919 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
SLC52A1-205ENST00000575919 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
SLC52A1-205ENST00000575919 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
SLC52A1-205ENST00000575919 GAPVD1Q14C86 1478 aa22.96■■□□□ 1.27
SLC52A1-205ENST00000575919 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
SLC52A1-205ENST00000575919 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
SLC52A1-205ENST00000575919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
SLC52A1-205ENST00000575919 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
SLC52A1-205ENST00000575919 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
SLC52A1-205ENST00000575919 CUL7Q14999 1698 aa22.9■■□□□ 1.26
SLC52A1-205ENST00000575919 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
SLC52A1-205ENST00000575919 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.25
SLC52A1-205ENST00000575919 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
SLC52A1-205ENST00000575919 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms