RNA–Protein interactions for RNA: ENST00000575770.5

ABR-232, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-232ENST00000575770 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
ABR-232ENST00000575770 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.16
ABR-232ENST00000575770 ABCC9O60706 1549 aa13.51□□□□□ -0.25
ABR-232ENST00000575770 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
ABR-232ENST00000575770 NACADO15069 1562 aa13.16□□□□□ -0.3
ABR-232ENST00000575770 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
ABR-232ENST00000575770 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
ABR-232ENST00000575770 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
ABR-232ENST00000575770 DCAF8L2P0C7V8 631 aa13.09□□□□□ -0.31
ABR-232ENST00000575770 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
ABR-232ENST00000575770 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
ABR-232ENST00000575770 SHROOM4Q9ULL8 1493 aa12.67□□□□□ -0.38
ABR-232ENST00000575770 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
ABR-232ENST00000575770 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
ABR-232ENST00000575770 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
ABR-232ENST00000575770 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
ABR-232ENST00000575770 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
ABR-232ENST00000575770 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
ABR-232ENST00000575770 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
ABR-232ENST00000575770 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
ABR-232ENST00000575770 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
ABR-232ENST00000575770 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
ABR-232ENST00000575770 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
ABR-232ENST00000575770 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
ABR-232ENST00000575770 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
ABR-232ENST00000575770 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
ABR-232ENST00000575770 BAZ1BQ9UIG0 1483 aaKnown RBP12.07□□□□□ -0.48
ABR-232ENST00000575770 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
ABR-232ENST00000575770 WIZO95785 1651 aa12.03□□□□□ -0.48
ABR-232ENST00000575770 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
ABR-232ENST00000575770 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.5
ABR-232ENST00000575770 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
ABR-232ENST00000575770 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
ABR-232ENST00000575770 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
ABR-232ENST00000575770 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
ABR-232ENST00000575770 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
ABR-232ENST00000575770 CFTRP13569 1480 aa11.71□□□□□ -0.53
ABR-232ENST00000575770 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
ABR-232ENST00000575770 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
ABR-232ENST00000575770 NESP48681 1621 aa11.71□□□□□ -0.54
ABR-232ENST00000575770 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
ABR-232ENST00000575770 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
ABR-232ENST00000575770 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
ABR-232ENST00000575770 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
ABR-232ENST00000575770 THOC2Q8NI27 1593 aaKnown RBP11.57□□□□□ -0.56
ABR-232ENST00000575770 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
ABR-232ENST00000575770 CUX2O14529 1486 aa11.54□□□□□ -0.56
ABR-232ENST00000575770 ABCC8Q09428 1581 aa11.53□□□□□ -0.56
ABR-232ENST00000575770 WDR62O43379 1518 aa11.52□□□□□ -0.57
ABR-232ENST00000575770 DNMBPQ6XZF7 1577 aa11.49□□□□□ -0.57
ABR-232ENST00000575770 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
ABR-232ENST00000575770 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
ABR-232ENST00000575770 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
ABR-232ENST00000575770 CUX1P39880 1505 aa11.4□□□□□ -0.59
ABR-232ENST00000575770 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
ABR-232ENST00000575770 BIVM-ERCC5R4GMW8 1640 aa11.38□□□□□ -0.59
ABR-232ENST00000575770 IFT140Q96RY7 1462 aa11.37□□□□□ -0.59
ABR-232ENST00000575770 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
ABR-232ENST00000575770 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
ABR-232ENST00000575770 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
ABR-232ENST00000575770 WDR97A6NE52 1622 aa11.33□□□□□ -0.6
ABR-232ENST00000575770 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
ABR-232ENST00000575770 SOGA1O94964 1423 aa11.31□□□□□ -0.6
ABR-232ENST00000575770 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
ABR-232ENST00000575770 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
ABR-232ENST00000575770 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
ABR-232ENST00000575770 ZNF608Q9ULD9 1512 aaPredicted RBP11.23□□□□□ -0.61
ABR-232ENST00000575770 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
ABR-232ENST00000575770 PBRM1Q86U86 1689 aa11.21□□□□□ -0.61
ABR-232ENST00000575770 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
ABR-232ENST00000575770 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
ABR-232ENST00000575770 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
ABR-232ENST00000575770 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
ABR-232ENST00000575770 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
ABR-232ENST00000575770 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
ABR-232ENST00000575770 MAGI1Q96QZ7 1491 aaPredicted RBP11.17□□□□□ -0.62
ABR-232ENST00000575770 ERICH3Q5RHP9 1530 aa11.16□□□□□ -0.62
ABR-232ENST00000575770 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
ABR-232ENST00000575770 CUL7Q14999 1698 aa11.13□□□□□ -0.63
ABR-232ENST00000575770 CHD1O14646 1710 aa11.12□□□□□ -0.63
ABR-232ENST00000575770 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
ABR-232ENST00000575770 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
ABR-232ENST00000575770 EEA1Q15075 1411 aa11.09□□□□□ -0.63
ABR-232ENST00000575770 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
ABR-232ENST00000575770 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
ABR-232ENST00000575770 FBLN2P98095 1184 aa11.06□□□□□ -0.64
ABR-232ENST00000575770 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
ABR-232ENST00000575770 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
ABR-232ENST00000575770 IGF1RP08069 1367 aa11.03□□□□□ -0.64
ABR-232ENST00000575770 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
ABR-232ENST00000575770 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
ABR-232ENST00000575770 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
ABR-232ENST00000575770 NUP160Q12769 1436 aa10.97□□□□□ -0.65
ABR-232ENST00000575770 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
ABR-232ENST00000575770 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
ABR-232ENST00000575770 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
ABR-232ENST00000575770 PRXQ9BXM0 1461 aa10.95□□□□□ -0.66
ABR-232ENST00000575770 KIF21BO75037 1637 aa10.95□□□□□ -0.66
ABR-232ENST00000575770 CTTNBP2Q8WZ74 1663 aa10.94□□□□□ -0.66
ABR-232ENST00000575770 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms