RNA–Protein interactions for RNA: ENST00000575256.1

MPDU1-213, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 392 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-213ENST00000575256 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.5
MPDU1-213ENST00000575256 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
MPDU1-213ENST00000575256 ABCC9O60706 1549 aa10.1□□□□□ -0.79
MPDU1-213ENST00000575256 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
MPDU1-213ENST00000575256 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
MPDU1-213ENST00000575256 DCAF1Q9Y4B6 1507 aa9.97□□□□□ -0.81
MPDU1-213ENST00000575256 CHIC1Q5VXU3 224 aa9.95□□□□□ -0.82
MPDU1-213ENST00000575256 NACADO15069 1562 aa9.92□□□□□ -0.82
MPDU1-213ENST00000575256 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
MPDU1-213ENST00000575256 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
MPDU1-213ENST00000575256 AEBP2Q6ZN18 517 aaPredicted RBP9.64□□□□□ -0.87
MPDU1-213ENST00000575256 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
MPDU1-213ENST00000575256 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
MPDU1-213ENST00000575256 PABPN1Q86U42 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
MPDU1-213ENST00000575256 BICRAQ9NZM4 1560 aa9.47□□□□□ -0.89
MPDU1-213ENST00000575256 UNC13AQ9UPW8 1703 aa9.43□□□□□ -0.9
MPDU1-213ENST00000575256 BAZ1AQ9NRL2 1556 aaPredicted RBP9.28□□□□□ -0.92
MPDU1-213ENST00000575256 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
MPDU1-213ENST00000575256 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
MPDU1-213ENST00000575256 SMARCA4P51532 1647 aa9.19□□□□□ -0.94
MPDU1-213ENST00000575256 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
MPDU1-213ENST00000575256 RSF1Q96T23 1441 aaPredicted RBP9.18□□□□□ -0.94
MPDU1-213ENST00000575256 NCAPD3P42695 1498 aa9.17□□□□□ -0.94
MPDU1-213ENST00000575256 MROH2BQ7Z745 1585 aa9.16□□□□□ -0.94
MPDU1-213ENST00000575256 PEG3Q9GZU2 1588 aa9.16□□□□□ -0.94
MPDU1-213ENST00000575256 ATAD2BQ9ULI0 1458 aa9.16□□□□□ -0.94
MPDU1-213ENST00000575256 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
MPDU1-213ENST00000575256 DNAJC5BQ9UF47 199 aa9.11□□□□□ -0.95
MPDU1-213ENST00000575256 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
MPDU1-213ENST00000575256 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
MPDU1-213ENST00000575256 SUPT5HO00267 1087 aaKnown RBP9.03□□□□□ -0.96
MPDU1-213ENST00000575256 TOP2AP11388 1531 aaKnown RBP9.03□□□□□ -0.96
MPDU1-213ENST00000575256 WIZO95785 1651 aa9.01□□□□□ -0.97
MPDU1-213ENST00000575256 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
MPDU1-213ENST00000575256 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
MPDU1-213ENST00000575256 CFTRP13569 1480 aa8.88□□□□□ -0.99
MPDU1-213ENST00000575256 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
MPDU1-213ENST00000575256 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
MPDU1-213ENST00000575256 PHF23Q9BUL5 403 aaPredicted RBP8.78□□□□□ -1
MPDU1-213ENST00000575256 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
MPDU1-213ENST00000575256 NESP48681 1621 aa8.76□□□□□ -1.01
MPDU1-213ENST00000575256 ERCC6Q03468 1493 aa8.76□□□□□ -1.01
MPDU1-213ENST00000575256 CEP164Q9UPV0 1460 aa8.75□□□□□ -1.01
MPDU1-213ENST00000575256 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
MPDU1-213ENST00000575256 MRC2Q9UBG0 1479 aa8.7□□□□□ -1.02
MPDU1-213ENST00000575256 WRNQ14191 1432 aaPredicted RBP eCLIP8.67□□□□□ -1.02
MPDU1-213ENST00000575256 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
MPDU1-213ENST00000575256 CUX2O14529 1486 aa8.65□□□□□ -1.02
MPDU1-213ENST00000575256 WDR62O43379 1518 aa8.64□□□□□ -1.03
MPDU1-213ENST00000575256 DNMBPQ6XZF7 1577 aa8.63□□□□□ -1.03
MPDU1-213ENST00000575256 URB2Q14146 1524 aaKnown RBP8.62□□□□□ -1.03
MPDU1-213ENST00000575256 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
MPDU1-213ENST00000575256 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
MPDU1-213ENST00000575256 KIF21AQ7Z4S6 1674 aa8.6□□□□□ -1.03
MPDU1-213ENST00000575256 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
MPDU1-213ENST00000575256 CUX1P39880 1505 aa8.59□□□□□ -1.03
MPDU1-213ENST00000575256 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
MPDU1-213ENST00000575256 IFT140Q96RY7 1462 aa8.58□□□□□ -1.04
MPDU1-213ENST00000575256 SOGA1O94964 1423 aa8.57□□□□□ -1.04
MPDU1-213ENST00000575256 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
MPDU1-213ENST00000575256 FGD5Q6ZNL6 1462 aa8.56□□□□□ -1.04
MPDU1-213ENST00000575256 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
MPDU1-213ENST00000575256 SYNJ1O43426 1573 aa8.53□□□□□ -1.04
MPDU1-213ENST00000575256 WDR97A6NE52 1622 aa8.53□□□□□ -1.04
MPDU1-213ENST00000575256 ABCA10Q8WWZ4 1543 aa8.53□□□□□ -1.04
MPDU1-213ENST00000575256 EEA1Q15075 1411 aa8.51□□□□□ -1.05
MPDU1-213ENST00000575256 KIF27Q86VH2 1401 aa8.51□□□□□ -1.05
MPDU1-213ENST00000575256 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
MPDU1-213ENST00000575256 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
MPDU1-213ENST00000575256 TDRD9Q8NDG6 1382 aaKnown RBP8.47□□□□□ -1.05
MPDU1-213ENST00000575256 GRIN2BQ13224 1484 aa8.46□□□□□ -1.05
MPDU1-213ENST00000575256 GAPVD1Q14C86 1478 aa8.46□□□□□ -1.05
MPDU1-213ENST00000575256 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■■■ 43
MPDU1-213ENST00000575256 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
MPDU1-213ENST00000575256 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
MPDU1-213ENST00000575256 IGF1RP08069 1367 aa8.43□□□□□ -1.06
MPDU1-213ENST00000575256 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
MPDU1-213ENST00000575256 CSRNP3Q8WYN3 585 aa8.42□□□□□ -1.06
MPDU1-213ENST00000575256 ABCA5Q8WWZ7 1642 aa8.4□□□□□ -1.06
MPDU1-213ENST00000575256 FHAD1B1AJZ9 1412 aa8.4□□□□□ -1.06
MPDU1-213ENST00000575256 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
MPDU1-213ENST00000575256 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
MPDU1-213ENST00000575256 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
MPDU1-213ENST00000575256 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
MPDU1-213ENST00000575256 SNAPC4Q5SXM2 1469 aa8.38□□□□□ -1.07
MPDU1-213ENST00000575256 PRXQ9BXM0 1461 aa8.36□□□□□ -1.07
MPDU1-213ENST00000575256 RAPGEF2Q9Y4G8 1499 aa8.35□□□□□ -1.07
MPDU1-213ENST00000575256 CUL7Q14999 1698 aa8.34□□□□□ -1.07
MPDU1-213ENST00000575256 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
MPDU1-213ENST00000575256 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.08
MPDU1-213ENST00000575256 FBLN2P98095 1184 aa8.33□□□□□ -1.08
MPDU1-213ENST00000575256 PLPPR3Q6T4P5 718 aa8.33□□□□□ -1.08
MPDU1-213ENST00000575256 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
MPDU1-213ENST00000575256 ADAMTS12P58397 1594 aa8.32□□□□□ -1.08
MPDU1-213ENST00000575256 FAM9AQ8IZU1 332 aaPredicted RBP8.32□□□□□ -1.08
MPDU1-213ENST00000575256 PBRM1Q86U86 1689 aa8.3□□□□□ -1.08
MPDU1-213ENST00000575256 NUP160Q12769 1436 aa8.3□□□□□ -1.08
MPDU1-213ENST00000575256 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
MPDU1-213ENST00000575256 KIF21BO75037 1637 aa8.29□□□□□ -1.08
MPDU1-213ENST00000575256 KIAA0586Q9BVV6 1533 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms