RNA–Protein interactions for RNA: ENST00000575201.2

PITPNM3-204, Transcript of PITPNM family member 3, humanhuman

TSL 3

Gene PITPNM3, Length 734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-204ENST00000575201 NISCHQ9Y2I1 1504 aa32.09■■■□□ 2.73
PITPNM3-204ENST00000575201 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
PITPNM3-204ENST00000575201 CCDC180Q9P1Z9 1646 aa28.48■■■□□ 2.15
PITPNM3-204ENST00000575201 ABCC9O60706 1549 aa27.58■■■□□ 2.01
PITPNM3-204ENST00000575201 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
PITPNM3-204ENST00000575201 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
PITPNM3-204ENST00000575201 NACADO15069 1562 aa26.67■■□□□ 1.86
PITPNM3-204ENST00000575201 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
PITPNM3-204ENST00000575201 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
PITPNM3-204ENST00000575201 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
PITPNM3-204ENST00000575201 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
PITPNM3-204ENST00000575201 UNC13AQ9UPW8 1703 aa26.16■■□□□ 1.78
PITPNM3-204ENST00000575201 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
PITPNM3-204ENST00000575201 BICRAQ9NZM4 1560 aa25.94■■□□□ 1.74
PITPNM3-204ENST00000575201 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
PITPNM3-204ENST00000575201 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
PITPNM3-204ENST00000575201 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
PITPNM3-204ENST00000575201 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
PITPNM3-204ENST00000575201 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PITPNM3-204ENST00000575201 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
PITPNM3-204ENST00000575201 SMARCA4P51532 1647 aa24.88■■□□□ 1.57
PITPNM3-204ENST00000575201 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
PITPNM3-204ENST00000575201 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PITPNM3-204ENST00000575201 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
PITPNM3-204ENST00000575201 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
PITPNM3-204ENST00000575201 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
PITPNM3-204ENST00000575201 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
PITPNM3-204ENST00000575201 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
PITPNM3-204ENST00000575201 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
PITPNM3-204ENST00000575201 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
PITPNM3-204ENST00000575201 WIZO95785 1651 aa24.5■■□□□ 1.51
PITPNM3-204ENST00000575201 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
PITPNM3-204ENST00000575201 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
PITPNM3-204ENST00000575201 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
PITPNM3-204ENST00000575201 NESP48681 1621 aa23.98■■□□□ 1.43
PITPNM3-204ENST00000575201 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
PITPNM3-204ENST00000575201 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
PITPNM3-204ENST00000575201 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
PITPNM3-204ENST00000575201 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
PITPNM3-204ENST00000575201 CFTRP13569 1480 aa23.81■■□□□ 1.4
PITPNM3-204ENST00000575201 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
PITPNM3-204ENST00000575201 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
PITPNM3-204ENST00000575201 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
PITPNM3-204ENST00000575201 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
PITPNM3-204ENST00000575201 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
PITPNM3-204ENST00000575201 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
PITPNM3-204ENST00000575201 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
PITPNM3-204ENST00000575201 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
PITPNM3-204ENST00000575201 WDR62O43379 1518 aa23.46■■□□□ 1.35
PITPNM3-204ENST00000575201 CUX2O14529 1486 aa23.44■■□□□ 1.34
PITPNM3-204ENST00000575201 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
PITPNM3-204ENST00000575201 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
PITPNM3-204ENST00000575201 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
PITPNM3-204ENST00000575201 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
PITPNM3-204ENST00000575201 CUX1P39880 1505 aa23.21■■□□□ 1.31
PITPNM3-204ENST00000575201 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
PITPNM3-204ENST00000575201 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
PITPNM3-204ENST00000575201 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.29
PITPNM3-204ENST00000575201 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
PITPNM3-204ENST00000575201 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
PITPNM3-204ENST00000575201 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
PITPNM3-204ENST00000575201 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
PITPNM3-204ENST00000575201 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
PITPNM3-204ENST00000575201 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
PITPNM3-204ENST00000575201 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
PITPNM3-204ENST00000575201 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
PITPNM3-204ENST00000575201 SOGA1O94964 1423 aa22.93■■□□□ 1.26
PITPNM3-204ENST00000575201 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
PITPNM3-204ENST00000575201 DNAJC5Q9H3Z4 198 aa22.91■■□□□ 1.26
PITPNM3-204ENST00000575201 FOXD1Q16676 465 aa22.86■■□□□ 1.25
PITPNM3-204ENST00000575201 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
PITPNM3-204ENST00000575201 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
PITPNM3-204ENST00000575201 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
PITPNM3-204ENST00000575201 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
PITPNM3-204ENST00000575201 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
PITPNM3-204ENST00000575201 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
PITPNM3-204ENST00000575201 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
PITPNM3-204ENST00000575201 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
PITPNM3-204ENST00000575201 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
PITPNM3-204ENST00000575201 CHD1O14646 1710 aa22.59■■□□□ 1.21
PITPNM3-204ENST00000575201 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
PITPNM3-204ENST00000575201 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
PITPNM3-204ENST00000575201 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
PITPNM3-204ENST00000575201 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
PITPNM3-204ENST00000575201 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
PITPNM3-204ENST00000575201 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
PITPNM3-204ENST00000575201 IGF1RP08069 1367 aa22.45■■□□□ 1.18
PITPNM3-204ENST00000575201 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
PITPNM3-204ENST00000575201 CUL7Q14999 1698 aa22.42■■□□□ 1.18
PITPNM3-204ENST00000575201 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
PITPNM3-204ENST00000575201 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
PITPNM3-204ENST00000575201 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
PITPNM3-204ENST00000575201 FBLN2P98095 1184 aa22.35■■□□□ 1.17
PITPNM3-204ENST00000575201 CHMP7Q8WUX9 453 aaPredicted RBP22.35■■□□□ 1.17
PITPNM3-204ENST00000575201 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
PITPNM3-204ENST00000575201 NUP160Q12769 1436 aa22.32■■□□□ 1.16
PITPNM3-204ENST00000575201 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
PITPNM3-204ENST00000575201 EEA1Q15075 1411 aa22.23■■□□□ 1.15
PITPNM3-204ENST00000575201 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
PITPNM3-204ENST00000575201 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms