RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
CXCL16-204ENST00000575168 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
CXCL16-204ENST00000575168 ABCC9O60706 1549 aa24.86■■□□□ 1.57
CXCL16-204ENST00000575168 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
CXCL16-204ENST00000575168 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
CXCL16-204ENST00000575168 DCAF1Q9Y4B6 1507 aa24.27■■□□□ 1.48
CXCL16-204ENST00000575168 NACADO15069 1562 aa24.26■■□□□ 1.47
CXCL16-204ENST00000575168 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
CXCL16-204ENST00000575168 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
CXCL16-204ENST00000575168 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
CXCL16-204ENST00000575168 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
CXCL16-204ENST00000575168 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
CXCL16-204ENST00000575168 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
CXCL16-204ENST00000575168 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
CXCL16-204ENST00000575168 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
CXCL16-204ENST00000575168 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
CXCL16-204ENST00000575168 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
CXCL16-204ENST00000575168 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
CXCL16-204ENST00000575168 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
CXCL16-204ENST00000575168 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
CXCL16-204ENST00000575168 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CXCL16-204ENST00000575168 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
CXCL16-204ENST00000575168 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
CXCL16-204ENST00000575168 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
CXCL16-204ENST00000575168 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
CXCL16-204ENST00000575168 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
CXCL16-204ENST00000575168 HMGXB3Q12766 1538 aa22.28■■□□□ 1.16
CXCL16-204ENST00000575168 WIZO95785 1651 aa22.27■■□□□ 1.16
CXCL16-204ENST00000575168 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
CXCL16-204ENST00000575168 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
CXCL16-204ENST00000575168 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
CXCL16-204ENST00000575168 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
CXCL16-204ENST00000575168 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
CXCL16-204ENST00000575168 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
CXCL16-204ENST00000575168 CFTRP13569 1480 aa21.64■■□□□ 1.06
CXCL16-204ENST00000575168 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
CXCL16-204ENST00000575168 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
CXCL16-204ENST00000575168 NESP48681 1621 aa21.58■■□□□ 1.04
CXCL16-204ENST00000575168 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
CXCL16-204ENST00000575168 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
CXCL16-204ENST00000575168 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
CXCL16-204ENST00000575168 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
CXCL16-204ENST00000575168 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
CXCL16-204ENST00000575168 ABCC8Q09428 1581 aa21.3■■□□□ 1
CXCL16-204ENST00000575168 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
CXCL16-204ENST00000575168 WDR62O43379 1518 aa21.18■□□□□ 0.98
CXCL16-204ENST00000575168 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
CXCL16-204ENST00000575168 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
CXCL16-204ENST00000575168 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
CXCL16-204ENST00000575168 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
CXCL16-204ENST00000575168 CUX2O14529 1486 aa21.13■□□□□ 0.97
CXCL16-204ENST00000575168 CUX1P39880 1505 aa21.08■□□□□ 0.96
CXCL16-204ENST00000575168 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
CXCL16-204ENST00000575168 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
CXCL16-204ENST00000575168 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
CXCL16-204ENST00000575168 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
CXCL16-204ENST00000575168 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
CXCL16-204ENST00000575168 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
CXCL16-204ENST00000575168 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
CXCL16-204ENST00000575168 SOGA1O94964 1423 aa20.95■□□□□ 0.94
CXCL16-204ENST00000575168 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
CXCL16-204ENST00000575168 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
CXCL16-204ENST00000575168 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
CXCL16-204ENST00000575168 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
CXCL16-204ENST00000575168 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
CXCL16-204ENST00000575168 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
CXCL16-204ENST00000575168 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
CXCL16-204ENST00000575168 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
CXCL16-204ENST00000575168 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
CXCL16-204ENST00000575168 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
CXCL16-204ENST00000575168 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
CXCL16-204ENST00000575168 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
CXCL16-204ENST00000575168 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
CXCL16-204ENST00000575168 EEA1Q15075 1411 aa20.65■□□□□ 0.9
CXCL16-204ENST00000575168 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
CXCL16-204ENST00000575168 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
CXCL16-204ENST00000575168 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
CXCL16-204ENST00000575168 CUL7Q14999 1698 aa20.54■□□□□ 0.88
CXCL16-204ENST00000575168 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
CXCL16-204ENST00000575168 IGF1RP08069 1367 aa20.51■□□□□ 0.87
CXCL16-204ENST00000575168 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
CXCL16-204ENST00000575168 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
CXCL16-204ENST00000575168 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
CXCL16-204ENST00000575168 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
CXCL16-204ENST00000575168 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
CXCL16-204ENST00000575168 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
CXCL16-204ENST00000575168 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
CXCL16-204ENST00000575168 FBLN2P98095 1184 aa20.45■□□□□ 0.86
CXCL16-204ENST00000575168 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
CXCL16-204ENST00000575168 CHD1O14646 1710 aa20.39■□□□□ 0.86
CXCL16-204ENST00000575168 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
CXCL16-204ENST00000575168 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
CXCL16-204ENST00000575168 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
CXCL16-204ENST00000575168 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
CXCL16-204ENST00000575168 KIF21BO75037 1637 aa20.32■□□□□ 0.84
CXCL16-204ENST00000575168 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
CXCL16-204ENST00000575168 NUP160Q12769 1436 aa20.24■□□□□ 0.83
CXCL16-204ENST00000575168 UBTFP17480 764 aaKnown RBP20.2■□□□□ 0.82
CXCL16-204ENST00000575168 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
CXCL16-204ENST00000575168 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms