RNA–Protein interactions for RNA: ENST00000574558.1

MPDU1-212, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-212ENST00000574558 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
MPDU1-212ENST00000574558 ABCC9O60706 1549 aa22.7■■□□□ 1.22
MPDU1-212ENST00000574558 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.15
MPDU1-212ENST00000574558 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
MPDU1-212ENST00000574558 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
MPDU1-212ENST00000574558 NACADO15069 1562 aa21.13■□□□□ 0.97
MPDU1-212ENST00000574558 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.962e-7■■■□□ 15
MPDU1-212ENST00000574558 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
MPDU1-212ENST00000574558 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
MPDU1-212ENST00000574558 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
MPDU1-212ENST00000574558 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
MPDU1-212ENST00000574558 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
MPDU1-212ENST00000574558 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
MPDU1-212ENST00000574558 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
MPDU1-212ENST00000574558 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
MPDU1-212ENST00000574558 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
MPDU1-212ENST00000574558 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
MPDU1-212ENST00000574558 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
MPDU1-212ENST00000574558 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
MPDU1-212ENST00000574558 CUX2O14529 1486 aa19.82■□□□□ 0.76
MPDU1-212ENST00000574558 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
MPDU1-212ENST00000574558 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
MPDU1-212ENST00000574558 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
MPDU1-212ENST00000574558 NESP48681 1621 aa19.36■□□□□ 0.69
MPDU1-212ENST00000574558 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
MPDU1-212ENST00000574558 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
MPDU1-212ENST00000574558 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
MPDU1-212ENST00000574558 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
MPDU1-212ENST00000574558 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
MPDU1-212ENST00000574558 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
MPDU1-212ENST00000574558 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
MPDU1-212ENST00000574558 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
MPDU1-212ENST00000574558 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
MPDU1-212ENST00000574558 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
MPDU1-212ENST00000574558 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
MPDU1-212ENST00000574558 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
MPDU1-212ENST00000574558 WDR62O43379 1518 aa18.9■□□□□ 0.62
MPDU1-212ENST00000574558 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
MPDU1-212ENST00000574558 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
MPDU1-212ENST00000574558 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
MPDU1-212ENST00000574558 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
MPDU1-212ENST00000574558 FANCD2Q9BXW9 1451 aa18.66■□□□□ 0.58
MPDU1-212ENST00000574558 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
MPDU1-212ENST00000574558 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
MPDU1-212ENST00000574558 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
MPDU1-212ENST00000574558 WIZO95785 1651 aa18.59■□□□□ 0.57
MPDU1-212ENST00000574558 CFTRP13569 1480 aa18.56■□□□□ 0.56
MPDU1-212ENST00000574558 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
MPDU1-212ENST00000574558 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
MPDU1-212ENST00000574558 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
MPDU1-212ENST00000574558 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
MPDU1-212ENST00000574558 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
MPDU1-212ENST00000574558 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
MPDU1-212ENST00000574558 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
MPDU1-212ENST00000574558 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
MPDU1-212ENST00000574558 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
MPDU1-212ENST00000574558 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
MPDU1-212ENST00000574558 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
MPDU1-212ENST00000574558 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
MPDU1-212ENST00000574558 CHD1O14646 1710 aa18.23■□□□□ 0.51
MPDU1-212ENST00000574558 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
MPDU1-212ENST00000574558 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
MPDU1-212ENST00000574558 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■■■■■ 43
MPDU1-212ENST00000574558 TARBP1Q13395 1621 aaKnown RBP18.14■□□□□ 0.49
MPDU1-212ENST00000574558 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
MPDU1-212ENST00000574558 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
MPDU1-212ENST00000574558 FBLN2P98095 1184 aa18.12■□□□□ 0.49
MPDU1-212ENST00000574558 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
MPDU1-212ENST00000574558 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
MPDU1-212ENST00000574558 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
MPDU1-212ENST00000574558 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
MPDU1-212ENST00000574558 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
MPDU1-212ENST00000574558 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
MPDU1-212ENST00000574558 SOGA1O94964 1423 aa17.94■□□□□ 0.46
MPDU1-212ENST00000574558 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
MPDU1-212ENST00000574558 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
MPDU1-212ENST00000574558 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
MPDU1-212ENST00000574558 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
MPDU1-212ENST00000574558 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
MPDU1-212ENST00000574558 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
MPDU1-212ENST00000574558 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
MPDU1-212ENST00000574558 CUX1P39880 1505 aa17.73■□□□□ 0.43
MPDU1-212ENST00000574558 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
MPDU1-212ENST00000574558 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
MPDU1-212ENST00000574558 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
MPDU1-212ENST00000574558 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
MPDU1-212ENST00000574558 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
MPDU1-212ENST00000574558 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
MPDU1-212ENST00000574558 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
MPDU1-212ENST00000574558 NUP160Q12769 1436 aa17.59■□□□□ 0.41
MPDU1-212ENST00000574558 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
MPDU1-212ENST00000574558 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
MPDU1-212ENST00000574558 ILDR1Q86SU0 546 aaPredicted RBP17.51■□□□□ 0.39
MPDU1-212ENST00000574558 KDM4FA0A1W2PPD8 638 aa17.5■□□□□ 0.39
MPDU1-212ENST00000574558 ABCC10Q5T3U5 1492 aa17.48■□□□□ 0.39
MPDU1-212ENST00000574558 FAM69CQ0P6D2 419 aa17.47■□□□□ 0.39
MPDU1-212ENST00000574558 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
MPDU1-212ENST00000574558 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
MPDU1-212ENST00000574558 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
MPDU1-212ENST00000574558 JPH4Q96JJ6 628 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms