RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
ABR-229ENST00000574544 ABCC9O60706 1549 aa18.9■□□□□ 0.62
ABR-229ENST00000574544 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
ABR-229ENST00000574544 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
ABR-229ENST00000574544 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
ABR-229ENST00000574544 NACADO15069 1562 aa17.89■□□□□ 0.45
ABR-229ENST00000574544 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
ABR-229ENST00000574544 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
ABR-229ENST00000574544 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
ABR-229ENST00000574544 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
ABR-229ENST00000574544 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
ABR-229ENST00000574544 SCRIBQ14160 1630 aa17.39■□□□□ 0.38
ABR-229ENST00000574544 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
ABR-229ENST00000574544 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
ABR-229ENST00000574544 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
ABR-229ENST00000574544 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
ABR-229ENST00000574544 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
ABR-229ENST00000574544 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
ABR-229ENST00000574544 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
ABR-229ENST00000574544 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
ABR-229ENST00000574544 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
ABR-229ENST00000574544 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
ABR-229ENST00000574544 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
ABR-229ENST00000574544 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
ABR-229ENST00000574544 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
ABR-229ENST00000574544 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
ABR-229ENST00000574544 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
ABR-229ENST00000574544 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
ABR-229ENST00000574544 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
ABR-229ENST00000574544 WIZO95785 1651 aa16.29■□□□□ 0.2
ABR-229ENST00000574544 NESP48681 1621 aa16.29■□□□□ 0.2
ABR-229ENST00000574544 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
ABR-229ENST00000574544 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
ABR-229ENST00000574544 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
ABR-229ENST00000574544 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
ABR-229ENST00000574544 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
ABR-229ENST00000574544 CUX2O14529 1486 aa16.03■□□□□ 0.16
ABR-229ENST00000574544 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
ABR-229ENST00000574544 CFTRP13569 1480 aa15.97■□□□□ 0.15
ABR-229ENST00000574544 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
ABR-229ENST00000574544 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
ABR-229ENST00000574544 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
ABR-229ENST00000574544 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
ABR-229ENST00000574544 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
ABR-229ENST00000574544 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
ABR-229ENST00000574544 WDR62O43379 1518 aa15.76■□□□□ 0.11
ABR-229ENST00000574544 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
ABR-229ENST00000574544 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
ABR-229ENST00000574544 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
ABR-229ENST00000574544 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
ABR-229ENST00000574544 FBLN2P98095 1184 aa15.59■□□□□ 0.09
ABR-229ENST00000574544 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
ABR-229ENST00000574544 SOGA1O94964 1423 aa15.57■□□□□ 0.08
ABR-229ENST00000574544 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
ABR-229ENST00000574544 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
ABR-229ENST00000574544 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
ABR-229ENST00000574544 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
ABR-229ENST00000574544 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
ABR-229ENST00000574544 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
ABR-229ENST00000574544 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
ABR-229ENST00000574544 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
ABR-229ENST00000574544 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
ABR-229ENST00000574544 CUX1P39880 1505 aa15.46■□□□□ 0.07
ABR-229ENST00000574544 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
ABR-229ENST00000574544 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
ABR-229ENST00000574544 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
ABR-229ENST00000574544 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
ABR-229ENST00000574544 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
ABR-229ENST00000574544 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
ABR-229ENST00000574544 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
ABR-229ENST00000574544 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
ABR-229ENST00000574544 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
ABR-229ENST00000574544 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
ABR-229ENST00000574544 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
ABR-229ENST00000574544 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
ABR-229ENST00000574544 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
ABR-229ENST00000574544 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
ABR-229ENST00000574544 CHD1O14646 1710 aa15.17■□□□□ 0.02
ABR-229ENST00000574544 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
ABR-229ENST00000574544 ARHGEF11O15085 1522 aa15.14■□□□□ 0.01
ABR-229ENST00000574544 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
ABR-229ENST00000574544 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 RIMBP3CA6NJZ7 1639 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 RIMBP3BA6NNM3 1639 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 RIMBP3Q9UFD9 1639 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 IGF1RP08069 1367 aa15.11■□□□□ 0.01
ABR-229ENST00000574544 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
ABR-229ENST00000574544 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
ABR-229ENST00000574544 JPH4Q96JJ6 628 aa15.08■□□□□ 0
ABR-229ENST00000574544 GRIN2AQ12879 1464 aa15.08■□□□□ 0
ABR-229ENST00000574544 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
ABR-229ENST00000574544 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
ABR-229ENST00000574544 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
ABR-229ENST00000574544 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
ABR-229ENST00000574544 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
ABR-229ENST00000574544 ADAMTS12P58397 1594 aa15□□□□□ -0.01
ABR-229ENST00000574544 NUP160Q12769 1436 aa14.99□□□□□ -0.01
ABR-229ENST00000574544 FAM9AQ8IZU1 332 aaPredicted RBP14.97□□□□□ -0.01
ABR-229ENST00000574544 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms