RNA–Protein interactions for RNA: ENST00000574509.1

MRM3-203, Transcript of mitochondrial rRNA methyltransferase 3, humanhuman

TSL 2

Gene MRM3, Length 727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3-203ENST00000574509 NISCHQ9Y2I1 1504 aa37.64■■■■□ 3.62
MRM3-203ENST00000574509 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
MRM3-203ENST00000574509 ABCC9O60706 1549 aa33.26■■■□□ 2.91
MRM3-203ENST00000574509 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
MRM3-203ENST00000574509 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
MRM3-203ENST00000574509 NACADO15069 1562 aa31.52■■■□□ 2.64
MRM3-203ENST00000574509 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
MRM3-203ENST00000574509 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
MRM3-203ENST00000574509 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
MRM3-203ENST00000574509 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
MRM3-203ENST00000574509 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
MRM3-203ENST00000574509 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
MRM3-203ENST00000574509 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
MRM3-203ENST00000574509 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
MRM3-203ENST00000574509 SHROOM4Q9ULL8 1493 aa30.29■■■□□ 2.44
MRM3-203ENST00000574509 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
MRM3-203ENST00000574509 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
MRM3-203ENST00000574509 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
MRM3-203ENST00000574509 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
MRM3-203ENST00000574509 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
MRM3-203ENST00000574509 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
MRM3-203ENST00000574509 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
MRM3-203ENST00000574509 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
MRM3-203ENST00000574509 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
MRM3-203ENST00000574509 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
MRM3-203ENST00000574509 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
MRM3-203ENST00000574509 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
MRM3-203ENST00000574509 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
MRM3-203ENST00000574509 WIZO95785 1651 aa28.69■■■□□ 2.18
MRM3-203ENST00000574509 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
MRM3-203ENST00000574509 NESP48681 1621 aa28.58■■■□□ 2.17
MRM3-203ENST00000574509 CUX2O14529 1486 aa28.58■■■□□ 2.17
MRM3-203ENST00000574509 DNAJC5Q9H3Z4 198 aa28.49■■■□□ 2.15
MRM3-203ENST00000574509 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
MRM3-203ENST00000574509 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
MRM3-203ENST00000574509 CADPSQ9ULU8 1353 aa28.28■■■□□ 2.12
MRM3-203ENST00000574509 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
MRM3-203ENST00000574509 THOC2Q8NI27 1593 aaKnown RBP28.21■■■□□ 2.11
MRM3-203ENST00000574509 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
MRM3-203ENST00000574509 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
MRM3-203ENST00000574509 CFTRP13569 1480 aa28.07■■■□□ 2.08
MRM3-203ENST00000574509 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
MRM3-203ENST00000574509 FANCD2Q9BXW9 1451 aa27.93■■■□□ 2.06
MRM3-203ENST00000574509 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
MRM3-203ENST00000574509 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
MRM3-203ENST00000574509 WDR62O43379 1518 aa27.87■■■□□ 2.05
MRM3-203ENST00000574509 PRDM2Q13029 1718 aa27.76■■■□□ 2.03
MRM3-203ENST00000574509 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
MRM3-203ENST00000574509 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
MRM3-203ENST00000574509 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
MRM3-203ENST00000574509 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.98
MRM3-203ENST00000574509 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
MRM3-203ENST00000574509 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
MRM3-203ENST00000574509 IFT140Q96RY7 1462 aa27.33■■□□□ 1.97
MRM3-203ENST00000574509 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
MRM3-203ENST00000574509 CUX1P39880 1505 aa27.22■■□□□ 1.95
MRM3-203ENST00000574509 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
MRM3-203ENST00000574509 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
MRM3-203ENST00000574509 SOGA1O94964 1423 aa27.16■■□□□ 1.94
MRM3-203ENST00000574509 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
MRM3-203ENST00000574509 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
MRM3-203ENST00000574509 EIF4G3O43432 1585 aaKnown RBP27.1■■□□□ 1.93
MRM3-203ENST00000574509 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.931e-7■■■■■ 38.9
MRM3-203ENST00000574509 TDRD9Q8NDG6 1382 aaKnown RBP27.02■■□□□ 1.92
MRM3-203ENST00000574509 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
MRM3-203ENST00000574509 FBLN2P98095 1184 aa26.96■■□□□ 1.91
MRM3-203ENST00000574509 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
MRM3-203ENST00000574509 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
MRM3-203ENST00000574509 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
MRM3-203ENST00000574509 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
MRM3-203ENST00000574509 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
MRM3-203ENST00000574509 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
MRM3-203ENST00000574509 CHD1O14646 1710 aa26.9■■□□□ 1.9
MRM3-203ENST00000574509 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
MRM3-203ENST00000574509 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
MRM3-203ENST00000574509 ARHGEF11O15085 1522 aa26.86■■□□□ 1.89
MRM3-203ENST00000574509 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
MRM3-203ENST00000574509 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
MRM3-203ENST00000574509 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
MRM3-203ENST00000574509 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
MRM3-203ENST00000574509 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
MRM3-203ENST00000574509 ABCA5Q8WWZ7 1642 aa26.74■■□□□ 1.87
MRM3-203ENST00000574509 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
MRM3-203ENST00000574509 PBRM1Q86U86 1689 aa26.7■■□□□ 1.86
MRM3-203ENST00000574509 SYNJ2O15056 1496 aa26.64■■□□□ 1.86
MRM3-203ENST00000574509 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
MRM3-203ENST00000574509 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
MRM3-203ENST00000574509 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
MRM3-203ENST00000574509 FHAD1B1AJZ9 1412 aa26.49■■□□□ 1.83
MRM3-203ENST00000574509 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
MRM3-203ENST00000574509 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
MRM3-203ENST00000574509 GRIN2AQ12879 1464 aa26.45■■□□□ 1.82
MRM3-203ENST00000574509 TRHP20396 242 aaPredicted RBP26.45■■□□□ 1.82
MRM3-203ENST00000574509 IGF1RP08069 1367 aa26.42■■□□□ 1.82
MRM3-203ENST00000574509 NUP160Q12769 1436 aa26.35■■□□□ 1.81
MRM3-203ENST00000574509 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
MRM3-203ENST00000574509 CUL7Q14999 1698 aa26.24■■□□□ 1.79
MRM3-203ENST00000574509 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
MRM3-203ENST00000574509 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
MRM3-203ENST00000574509 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms