RNA–Protein interactions for RNA: ENST00000573985.5

EDC4-206, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-206ENST00000573985 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
EDC4-206ENST00000573985 ABCC9O60706 1549 aa20.69■□□□□ 0.9
EDC4-206ENST00000573985 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
EDC4-206ENST00000573985 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
EDC4-206ENST00000573985 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
EDC4-206ENST00000573985 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.679e-10■■□□□ 14.1
EDC4-206ENST00000573985 NACADO15069 1562 aa19.12■□□□□ 0.65
EDC4-206ENST00000573985 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
EDC4-206ENST00000573985 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
EDC4-206ENST00000573985 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
EDC4-206ENST00000573985 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
EDC4-206ENST00000573985 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
EDC4-206ENST00000573985 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.58
EDC4-206ENST00000573985 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
EDC4-206ENST00000573985 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
EDC4-206ENST00000573985 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
EDC4-206ENST00000573985 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
EDC4-206ENST00000573985 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
EDC4-206ENST00000573985 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
EDC4-206ENST00000573985 CUX2O14529 1486 aa17.92■□□□□ 0.46
EDC4-206ENST00000573985 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
EDC4-206ENST00000573985 NESP48681 1621 aa17.67■□□□□ 0.42
EDC4-206ENST00000573985 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
EDC4-206ENST00000573985 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
EDC4-206ENST00000573985 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
EDC4-206ENST00000573985 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
EDC4-206ENST00000573985 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
EDC4-206ENST00000573985 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
EDC4-206ENST00000573985 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
EDC4-206ENST00000573985 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
EDC4-206ENST00000573985 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
EDC4-206ENST00000573985 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
EDC4-206ENST00000573985 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
EDC4-206ENST00000573985 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
EDC4-206ENST00000573985 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
EDC4-206ENST00000573985 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
EDC4-206ENST00000573985 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
EDC4-206ENST00000573985 WDR62O43379 1518 aa17.15■□□□□ 0.34
EDC4-206ENST00000573985 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
EDC4-206ENST00000573985 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
EDC4-206ENST00000573985 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
EDC4-206ENST00000573985 WIZO95785 1651 aa16.97■□□□□ 0.31
EDC4-206ENST00000573985 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.3
EDC4-206ENST00000573985 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.3
EDC4-206ENST00000573985 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.3
EDC4-206ENST00000573985 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
EDC4-206ENST00000573985 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
EDC4-206ENST00000573985 CFTRP13569 1480 aa16.82■□□□□ 0.28
EDC4-206ENST00000573985 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
EDC4-206ENST00000573985 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
EDC4-206ENST00000573985 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
EDC4-206ENST00000573985 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
EDC4-206ENST00000573985 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
EDC4-206ENST00000573985 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
EDC4-206ENST00000573985 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
EDC4-206ENST00000573985 CHD1O14646 1710 aa16.64■□□□□ 0.25
EDC4-206ENST00000573985 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
EDC4-206ENST00000573985 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
EDC4-206ENST00000573985 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
EDC4-206ENST00000573985 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
EDC4-206ENST00000573985 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.244e-7■■■■□ 21.7
EDC4-206ENST00000573985 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
EDC4-206ENST00000573985 FBLN2P98095 1184 aa16.51■□□□□ 0.23
EDC4-206ENST00000573985 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
EDC4-206ENST00000573985 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
EDC4-206ENST00000573985 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
EDC4-206ENST00000573985 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
EDC4-206ENST00000573985 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
EDC4-206ENST00000573985 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
EDC4-206ENST00000573985 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
EDC4-206ENST00000573985 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
EDC4-206ENST00000573985 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
EDC4-206ENST00000573985 SOGA1O94964 1423 aa16.29■□□□□ 0.2
EDC4-206ENST00000573985 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
EDC4-206ENST00000573985 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
EDC4-206ENST00000573985 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
EDC4-206ENST00000573985 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
EDC4-206ENST00000573985 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
EDC4-206ENST00000573985 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
EDC4-206ENST00000573985 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
EDC4-206ENST00000573985 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
EDC4-206ENST00000573985 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
EDC4-206ENST00000573985 CUX1P39880 1505 aa16.15■□□□□ 0.18
EDC4-206ENST00000573985 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
EDC4-206ENST00000573985 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.17
EDC4-206ENST00000573985 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
EDC4-206ENST00000573985 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
EDC4-206ENST00000573985 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
EDC4-206ENST00000573985 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
EDC4-206ENST00000573985 SHROOM2Q13796 1616 aa15.96■□□□□ 0.15
EDC4-206ENST00000573985 NUP160Q12769 1436 aa15.94■□□□□ 0.14
EDC4-206ENST00000573985 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
EDC4-206ENST00000573985 ADAMTS12P58397 1594 aa15.94■□□□□ 0.14
EDC4-206ENST00000573985 KDM4FA0A1W2PPD8 638 aa15.92■□□□□ 0.14
EDC4-206ENST00000573985 FAM69CQ0P6D2 419 aa15.88■□□□□ 0.13
EDC4-206ENST00000573985 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
EDC4-206ENST00000573985 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
EDC4-206ENST00000573985 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
EDC4-206ENST00000573985 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
EDC4-206ENST00000573985 DIP2BQ9P265 1576 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms