RNA–Protein interactions for RNA: ENST00000572793.2

SRGAP2-202, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 5

Gene SRGAP2, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-202ENST00000572793 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
SRGAP2-202ENST00000572793 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
SRGAP2-202ENST00000572793 ABCC9O60706 1549 aa16.55■□□□□ 0.24
SRGAP2-202ENST00000572793 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
SRGAP2-202ENST00000572793 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
SRGAP2-202ENST00000572793 NACADO15069 1562 aa15.7■□□□□ 0.1
SRGAP2-202ENST00000572793 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
SRGAP2-202ENST00000572793 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
SRGAP2-202ENST00000572793 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-202ENST00000572793 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
SRGAP2-202ENST00000572793 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
SRGAP2-202ENST00000572793 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
SRGAP2-202ENST00000572793 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
SRGAP2-202ENST00000572793 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
SRGAP2-202ENST00000572793 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
SRGAP2-202ENST00000572793 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
SRGAP2-202ENST00000572793 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
SRGAP2-202ENST00000572793 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
SRGAP2-202ENST00000572793 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
SRGAP2-202ENST00000572793 ATAD2BQ9ULI0 1458 aa14.52□□□□□ -0.08
SRGAP2-202ENST00000572793 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
SRGAP2-202ENST00000572793 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
SRGAP2-202ENST00000572793 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
SRGAP2-202ENST00000572793 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
SRGAP2-202ENST00000572793 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
SRGAP2-202ENST00000572793 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
SRGAP2-202ENST00000572793 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
SRGAP2-202ENST00000572793 NESP48681 1621 aa14.26□□□□□ -0.13
SRGAP2-202ENST00000572793 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SRGAP2-202ENST00000572793 WIZO95785 1651 aa14.2□□□□□ -0.14
SRGAP2-202ENST00000572793 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
SRGAP2-202ENST00000572793 CUX2O14529 1486 aa14.14□□□□□ -0.15
SRGAP2-202ENST00000572793 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
SRGAP2-202ENST00000572793 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
SRGAP2-202ENST00000572793 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
SRGAP2-202ENST00000572793 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
SRGAP2-202ENST00000572793 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
SRGAP2-202ENST00000572793 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
SRGAP2-202ENST00000572793 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
SRGAP2-202ENST00000572793 CFTRP13569 1480 aa13.97□□□□□ -0.17
SRGAP2-202ENST00000572793 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
SRGAP2-202ENST00000572793 WDR62O43379 1518 aa13.87□□□□□ -0.19
SRGAP2-202ENST00000572793 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
SRGAP2-202ENST00000572793 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
SRGAP2-202ENST00000572793 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
SRGAP2-202ENST00000572793 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SRGAP2-202ENST00000572793 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
SRGAP2-202ENST00000572793 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
SRGAP2-202ENST00000572793 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
SRGAP2-202ENST00000572793 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
SRGAP2-202ENST00000572793 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
SRGAP2-202ENST00000572793 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
SRGAP2-202ENST00000572793 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
SRGAP2-202ENST00000572793 SOGA1O94964 1423 aa13.54□□□□□ -0.24
SRGAP2-202ENST00000572793 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
SRGAP2-202ENST00000572793 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
SRGAP2-202ENST00000572793 CUX1P39880 1505 aa13.51□□□□□ -0.25
SRGAP2-202ENST00000572793 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
SRGAP2-202ENST00000572793 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
SRGAP2-202ENST00000572793 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
SRGAP2-202ENST00000572793 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
SRGAP2-202ENST00000572793 FBLN2P98095 1184 aa13.45□□□□□ -0.26
SRGAP2-202ENST00000572793 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
SRGAP2-202ENST00000572793 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
SRGAP2-202ENST00000572793 CHD1O14646 1710 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
SRGAP2-202ENST00000572793 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
SRGAP2-202ENST00000572793 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
SRGAP2-202ENST00000572793 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.29
SRGAP2-202ENST00000572793 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
SRGAP2-202ENST00000572793 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
SRGAP2-202ENST00000572793 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
SRGAP2-202ENST00000572793 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
SRGAP2-202ENST00000572793 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
SRGAP2-202ENST00000572793 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
SRGAP2-202ENST00000572793 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
SRGAP2-202ENST00000572793 NUP160Q12769 1436 aa13.14□□□□□ -0.31
SRGAP2-202ENST00000572793 IGF1RP08069 1367 aa13.13□□□□□ -0.31
SRGAP2-202ENST00000572793 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
SRGAP2-202ENST00000572793 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
SRGAP2-202ENST00000572793 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
SRGAP2-202ENST00000572793 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
SRGAP2-202ENST00000572793 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
SRGAP2-202ENST00000572793 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
SRGAP2-202ENST00000572793 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms