RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 NISCHQ9Y2I1 1504 aa53.12■■■■■ 6.09
RAB40B-207ENST00000572603 CCDC180Q9P1Z9 1646 aa47.11■■■■■ 5.13
RAB40B-207ENST00000572603 ABCC9O60706 1549 aa45.47■■■■■ 4.87
RAB40B-207ENST00000572603 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
RAB40B-207ENST00000572603 NACADO15069 1562 aa44.06■■■■■ 4.64
RAB40B-207ENST00000572603 DCAF1Q9Y4B6 1507 aa44.01■■■■■ 4.64
RAB40B-207ENST00000572603 MYO15BQ96JP2 1530 aa44■■■■■ 4.63
RAB40B-207ENST00000572603 RB1CC1Q8TDY2 1594 aa43.99■■■■■ 4.63
RAB40B-207ENST00000572603 DCAF8L2P0C7V8 631 aa43.87■■■■■ 4.61
RAB40B-207ENST00000572603 UNC13AQ9UPW8 1703 aa43.19■■■■■ 4.5
RAB40B-207ENST00000572603 SCRIBQ14160 1630 aa42.97■■■■■ 4.47
RAB40B-207ENST00000572603 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
RAB40B-207ENST00000572603 PABPN1Q86U42 306 aaKnown RBP eCLIP42.47■■■■■ 4.39
RAB40B-207ENST00000572603 SHROOM4Q9ULL8 1493 aa42.28■■■■■ 4.36
RAB40B-207ENST00000572603 EIF4G1Q04637 1599 aaKnown RBP41.52■■■■■ 4.24
RAB40B-207ENST00000572603 CECR2Q9BXF3 1484 aa41.33■■■■■ 4.21
RAB40B-207ENST00000572603 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
RAB40B-207ENST00000572603 CC2D2AQ9P2K1 1620 aa41.22■■■■■ 4.19
RAB40B-207ENST00000572603 SMARCA4P51532 1647 aa41.17■■■■■ 4.18
RAB40B-207ENST00000572603 BAZ1AQ9NRL2 1556 aaPredicted RBP41.13■■■■■ 4.18
RAB40B-207ENST00000572603 MROH2BQ7Z745 1585 aa40.97■■■■■ 4.15
RAB40B-207ENST00000572603 PEG3Q9GZU2 1588 aa40.78■■■■■ 4.12
RAB40B-207ENST00000572603 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
RAB40B-207ENST00000572603 SMARCA2P51531 1590 aa40.72■■■■■ 4.11
RAB40B-207ENST00000572603 RSF1Q96T23 1441 aaPredicted RBP40.63■■■■■ 4.09
RAB40B-207ENST00000572603 NCAPD3P42695 1498 aa40.63■■■■■ 4.09
RAB40B-207ENST00000572603 WIZO95785 1651 aa40.58■■■■■ 4.09
RAB40B-207ENST00000572603 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
RAB40B-207ENST00000572603 BAZ1BQ9UIG0 1483 aaKnown RBP40.41■■■■■ 4.06
RAB40B-207ENST00000572603 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
RAB40B-207ENST00000572603 SUPT5HO00267 1087 aaKnown RBP39.79■■■■□ 3.96
RAB40B-207ENST00000572603 CCDC88BA6NC98 1476 aa39.62■■■■□ 3.93
RAB40B-207ENST00000572603 NESP48681 1621 aa39.54■■■■□ 3.92
RAB40B-207ENST00000572603 LAMC3Q9Y6N6 1575 aa39.52■■■■□ 3.92
RAB40B-207ENST00000572603 CADPSQ9ULU8 1353 aa39.42■■■■□ 3.9
RAB40B-207ENST00000572603 CFTRP13569 1480 aa39.36■■■■□ 3.89
RAB40B-207ENST00000572603 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
RAB40B-207ENST00000572603 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
RAB40B-207ENST00000572603 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
RAB40B-207ENST00000572603 ERCC6Q03468 1493 aa39.09■■■■□ 3.85
RAB40B-207ENST00000572603 FANCD2Q9BXW9 1451 aa39.01■■■■□ 3.84
RAB40B-207ENST00000572603 THOC2Q8NI27 1593 aaKnown RBP38.94■■■■□ 3.82
RAB40B-207ENST00000572603 CEP164Q9UPV0 1460 aa38.92■■■■□ 3.82
RAB40B-207ENST00000572603 MRC2Q9UBG0 1479 aa38.78■■■■□ 3.8
RAB40B-207ENST00000572603 WDR62O43379 1518 aa38.69■■■■□ 3.78
RAB40B-207ENST00000572603 URB2Q14146 1524 aaKnown RBP38.65■■■■□ 3.78
RAB40B-207ENST00000572603 CUX2O14529 1486 aa38.56■■■■□ 3.76
RAB40B-207ENST00000572603 DNMBPQ6XZF7 1577 aa38.52■■■■□ 3.76
RAB40B-207ENST00000572603 TOPBP1Q92547 1522 aa38.48■■■■□ 3.75
RAB40B-207ENST00000572603 ABCC8Q09428 1581 aa38.43■■■■□ 3.74
RAB40B-207ENST00000572603 CUX1P39880 1505 aa38.41■■■■□ 3.74
RAB40B-207ENST00000572603 WRNQ14191 1432 aaPredicted RBP eCLIP38.27■■■■□ 3.72
RAB40B-207ENST00000572603 SYNJ1O43426 1573 aa38.27■■■■□ 3.72
RAB40B-207ENST00000572603 BIVM-ERCC5R4GMW8 1640 aa38.27■■■■□ 3.72
RAB40B-207ENST00000572603 TOP2BQ02880 1626 aa38.22■■■■□ 3.71
RAB40B-207ENST00000572603 POLA1P09884 1462 aaPredicted RBP38.19■■■■□ 3.7
RAB40B-207ENST00000572603 FGD5Q6ZNL6 1462 aa38.17■■■■□ 3.7
RAB40B-207ENST00000572603 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
RAB40B-207ENST00000572603 IFT140Q96RY7 1462 aa38.08■■■■□ 3.69
RAB40B-207ENST00000572603 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
RAB40B-207ENST00000572603 WDR97A6NE52 1622 aa37.98■■■■□ 3.67
RAB40B-207ENST00000572603 SOGA1O94964 1423 aa37.94■■■■□ 3.66
RAB40B-207ENST00000572603 ZNF608Q9ULD9 1512 aaPredicted RBP37.91■■■■□ 3.66
RAB40B-207ENST00000572603 EIF4G3O43432 1585 aaKnown RBP37.85■■■■□ 3.65
RAB40B-207ENST00000572603 ABCA10Q8WWZ4 1543 aa37.82■■■■□ 3.65
RAB40B-207ENST00000572603 ABCA5Q8WWZ7 1642 aa37.72■■■■□ 3.63
RAB40B-207ENST00000572603 AQRO60306 1485 aaKnown RBP eCLIP37.69■■■■□ 3.62
RAB40B-207ENST00000572603 TDRD9Q8NDG6 1382 aaKnown RBP37.67■■■■□ 3.62
RAB40B-207ENST00000572603 PBRM1Q86U86 1689 aa37.6■■■■□ 3.61
RAB40B-207ENST00000572603 GAPVD1Q14C86 1478 aa37.56■■■■□ 3.6
RAB40B-207ENST00000572603 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
RAB40B-207ENST00000572603 CHIC1Q5VXU3 224 aa37.5■■■■□ 3.59
RAB40B-207ENST00000572603 GRIN2BQ13224 1484 aa37.49■■■■□ 3.59
RAB40B-207ENST00000572603 SNAPC4Q5SXM2 1469 aa37.41■■■■□ 3.58
RAB40B-207ENST00000572603 KIF27Q86VH2 1401 aa37.39■■■■□ 3.58
RAB40B-207ENST00000572603 ERICH3Q5RHP9 1530 aa37.38■■■■□ 3.57
RAB40B-207ENST00000572603 MAGI1Q96QZ7 1491 aaPredicted RBP37.37■■■■□ 3.57
RAB40B-207ENST00000572603 ADAMTS12P58397 1594 aa37.31■■■■□ 3.56
RAB40B-207ENST00000572603 CHD1O14646 1710 aa37.3■■■■□ 3.56
RAB40B-207ENST00000572603 RUSC2Q8N2Y8 1516 aa37.29■■■■□ 3.56
RAB40B-207ENST00000572603 SYNJ2O15056 1496 aa37.2■■■■□ 3.55
RAB40B-207ENST00000572603 CUL7Q14999 1698 aa37.18■■■■□ 3.54
RAB40B-207ENST00000572603 IGF1RP08069 1367 aa37.17■■■■□ 3.54
RAB40B-207ENST00000572603 FHAD1B1AJZ9 1412 aa37.14■■■■□ 3.54
RAB40B-207ENST00000572603 GRIN2AQ12879 1464 aa37.05■■■■□ 3.52
RAB40B-207ENST00000572603 EEA1Q15075 1411 aa37.02■■■■□ 3.52
RAB40B-207ENST00000572603 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
RAB40B-207ENST00000572603 FBLN2P98095 1184 aa36.97■■■■□ 3.51
RAB40B-207ENST00000572603 CARMIL1Q5VZK9 1371 aa36.95■■■■□ 3.51
RAB40B-207ENST00000572603 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
RAB40B-207ENST00000572603 OSCARQ8IYS5 282 aa36.89■■■■□ 3.5
RAB40B-207ENST00000572603 CLASP1Q7Z460 1538 aa36.89■■■■□ 3.5
RAB40B-207ENST00000572603 PRXQ9BXM0 1461 aa36.88■■■■□ 3.5
RAB40B-207ENST00000572603 NUP160Q12769 1436 aa36.87■■■■□ 3.49
RAB40B-207ENST00000572603 RAPGEF2Q9Y4G8 1499 aa36.82■■■■□ 3.49
RAB40B-207ENST00000572603 CSRNP3Q8WYN3 585 aa36.81■■■■□ 3.48
RAB40B-207ENST00000572603 FAM9AQ8IZU1 332 aaPredicted RBP36.77■■■■□ 3.48
RAB40B-207ENST00000572603 KIF21BO75037 1637 aa36.72■■■■□ 3.47
RAB40B-207ENST00000572603 DNAJC5Q9H3Z4 198 aa36.68■■■■□ 3.46
RAB40B-207ENST00000572603 SHROOM2Q13796 1616 aa36.62■■■■□ 3.45
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