RNA–Protein interactions for RNA: ENST00000572429.5

USP6-203, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 5

Gene USP6, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-203ENST00000572429 NISCHQ9Y2I1 1504 aa36.61■■■■□ 3.45
USP6-203ENST00000572429 ABCC9O60706 1549 aa33.87■■■■□ 3.01
USP6-203ENST00000572429 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
USP6-203ENST00000572429 DNAJC5BQ9UF47 199 aa32.5■■■□□ 2.79
USP6-203ENST00000572429 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
USP6-203ENST00000572429 NACADO15069 1562 aa31.52■■■□□ 2.64
USP6-203ENST00000572429 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
USP6-203ENST00000572429 DCAF8L2P0C7V8 631 aa31.19■■■□□ 2.58
USP6-203ENST00000572429 UNC13AQ9UPW8 1703 aa31.17■■■□□ 2.58
USP6-203ENST00000572429 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
USP6-203ENST00000572429 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
USP6-203ENST00000572429 CECR2Q9BXF3 1484 aa30.59■■■□□ 2.49
USP6-203ENST00000572429 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
USP6-203ENST00000572429 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.48
USP6-203ENST00000572429 DNAJC5Q9H3Z4 198 aa30.35■■■□□ 2.45
USP6-203ENST00000572429 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
USP6-203ENST00000572429 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
USP6-203ENST00000572429 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
USP6-203ENST00000572429 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
USP6-203ENST00000572429 CUX2O14529 1486 aa29.48■■■□□ 2.31
USP6-203ENST00000572429 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
USP6-203ENST00000572429 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
USP6-203ENST00000572429 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
USP6-203ENST00000572429 NESP48681 1621 aa28.9■■■□□ 2.22
USP6-203ENST00000572429 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
USP6-203ENST00000572429 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
USP6-203ENST00000572429 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
USP6-203ENST00000572429 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
USP6-203ENST00000572429 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
USP6-203ENST00000572429 BAZ1BQ9UIG0 1483 aaKnown RBP28.58■■■□□ 2.17
USP6-203ENST00000572429 LAMC3Q9Y6N6 1575 aa28.56■■■□□ 2.16
USP6-203ENST00000572429 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
USP6-203ENST00000572429 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
USP6-203ENST00000572429 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
USP6-203ENST00000572429 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
USP6-203ENST00000572429 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
USP6-203ENST00000572429 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
USP6-203ENST00000572429 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
USP6-203ENST00000572429 WDR62O43379 1518 aa28.19■■■□□ 2.1
USP6-203ENST00000572429 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
USP6-203ENST00000572429 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
USP6-203ENST00000572429 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
USP6-203ENST00000572429 WIZO95785 1651 aa27.81■■■□□ 2.04
USP6-203ENST00000572429 CFTRP13569 1480 aa27.74■■■□□ 2.03
USP6-203ENST00000572429 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
USP6-203ENST00000572429 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
USP6-203ENST00000572429 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
USP6-203ENST00000572429 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
USP6-203ENST00000572429 ARHGEF11O15085 1522 aa27.57■■■□□ 2
USP6-203ENST00000572429 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
USP6-203ENST00000572429 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
USP6-203ENST00000572429 CYB5RLQ6IPT4 315 aa27.43■■□□□ 1.98
USP6-203ENST00000572429 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
USP6-203ENST00000572429 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
USP6-203ENST00000572429 PRDM2Q13029 1718 aa27.33■■□□□ 1.96
USP6-203ENST00000572429 TRHP20396 242 aaPredicted RBP27.32■■□□□ 1.96
USP6-203ENST00000572429 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
USP6-203ENST00000572429 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
USP6-203ENST00000572429 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
USP6-203ENST00000572429 CHD1O14646 1710 aa27.18■■□□□ 1.94
USP6-203ENST00000572429 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
USP6-203ENST00000572429 AQRO60306 1485 aaKnown RBP eCLIP27.15■■□□□ 1.94
USP6-203ENST00000572429 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
USP6-203ENST00000572429 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
USP6-203ENST00000572429 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
USP6-203ENST00000572429 FBLN2P98095 1184 aa27.07■■□□□ 1.92
USP6-203ENST00000572429 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
USP6-203ENST00000572429 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
USP6-203ENST00000572429 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
USP6-203ENST00000572429 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
USP6-203ENST00000572429 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
USP6-203ENST00000572429 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
USP6-203ENST00000572429 SOGA1O94964 1423 aa26.81■■□□□ 1.88
USP6-203ENST00000572429 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
USP6-203ENST00000572429 CHMP7Q8WUX9 453 aaPredicted RBP26.77■■□□□ 1.88
USP6-203ENST00000572429 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
USP6-203ENST00000572429 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
USP6-203ENST00000572429 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
USP6-203ENST00000572429 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
USP6-203ENST00000572429 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
USP6-203ENST00000572429 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
USP6-203ENST00000572429 CUX1P39880 1505 aa26.54■■□□□ 1.84
USP6-203ENST00000572429 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
USP6-203ENST00000572429 ERCC6L2Q5T890 1561 aa26.43■■□□□ 1.82
USP6-203ENST00000572429 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
USP6-203ENST00000572429 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
USP6-203ENST00000572429 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
USP6-203ENST00000572429 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
USP6-203ENST00000572429 NUP160Q12769 1436 aa26.28■■□□□ 1.8
USP6-203ENST00000572429 KIF13AQ9H1H9 1805 aa26.26■■□□□ 1.79
USP6-203ENST00000572429 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
USP6-203ENST00000572429 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
USP6-203ENST00000572429 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
USP6-203ENST00000572429 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
USP6-203ENST00000572429 PRG4Q92954 1404 aaPredicted RBP26.06■■□□□ 1.76
USP6-203ENST00000572429 ABCC10Q5T3U5 1492 aa26.06■■□□□ 1.76
USP6-203ENST00000572429 FAM69CQ0P6D2 419 aa26.06■■□□□ 1.76
USP6-203ENST00000572429 KDM4FA0A1W2PPD8 638 aa26.05■■□□□ 1.76
USP6-203ENST00000572429 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
USP6-203ENST00000572429 JPH4Q96JJ6 628 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms