RNA–Protein interactions for RNA: ENST00000572353.1

LINC01978-201, Transcript of long intergenic non-protein coding RNA 1978, humanhuman

TSL 2

Gene LINC01978, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01978-201ENST00000572353 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
LINC01978-201ENST00000572353 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
LINC01978-201ENST00000572353 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
LINC01978-201ENST00000572353 ABCC9O60706 1549 aa23.54■■□□□ 1.36
LINC01978-201ENST00000572353 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
LINC01978-201ENST00000572353 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
LINC01978-201ENST00000572353 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
LINC01978-201ENST00000572353 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
LINC01978-201ENST00000572353 NACADO15069 1562 aa22.97■■□□□ 1.27
LINC01978-201ENST00000572353 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
LINC01978-201ENST00000572353 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
LINC01978-201ENST00000572353 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
LINC01978-201ENST00000572353 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
LINC01978-201ENST00000572353 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
LINC01978-201ENST00000572353 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
LINC01978-201ENST00000572353 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
LINC01978-201ENST00000572353 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
LINC01978-201ENST00000572353 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
LINC01978-201ENST00000572353 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
LINC01978-201ENST00000572353 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
LINC01978-201ENST00000572353 WIZO95785 1651 aa21.63■■□□□ 1.05
LINC01978-201ENST00000572353 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
LINC01978-201ENST00000572353 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
LINC01978-201ENST00000572353 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
LINC01978-201ENST00000572353 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
LINC01978-201ENST00000572353 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
LINC01978-201ENST00000572353 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
LINC01978-201ENST00000572353 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
LINC01978-201ENST00000572353 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
LINC01978-201ENST00000572353 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
LINC01978-201ENST00000572353 HMGXB3Q12766 1538 aa21.17■□□□□ 0.98
LINC01978-201ENST00000572353 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
LINC01978-201ENST00000572353 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
LINC01978-201ENST00000572353 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
LINC01978-201ENST00000572353 CFTRP13569 1480 aa20.72■□□□□ 0.91
LINC01978-201ENST00000572353 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
LINC01978-201ENST00000572353 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
LINC01978-201ENST00000572353 NESP48681 1621 aa20.62■□□□□ 0.89
LINC01978-201ENST00000572353 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
LINC01978-201ENST00000572353 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
LINC01978-201ENST00000572353 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
LINC01978-201ENST00000572353 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
LINC01978-201ENST00000572353 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
LINC01978-201ENST00000572353 CUX1P39880 1505 aa20.43■□□□□ 0.86
LINC01978-201ENST00000572353 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
LINC01978-201ENST00000572353 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
LINC01978-201ENST00000572353 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
LINC01978-201ENST00000572353 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
LINC01978-201ENST00000572353 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
LINC01978-201ENST00000572353 SOGA1O94964 1423 aa20.31■□□□□ 0.84
LINC01978-201ENST00000572353 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
LINC01978-201ENST00000572353 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
LINC01978-201ENST00000572353 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
LINC01978-201ENST00000572353 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
LINC01978-201ENST00000572353 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
LINC01978-201ENST00000572353 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
LINC01978-201ENST00000572353 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
LINC01978-201ENST00000572353 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
LINC01978-201ENST00000572353 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
LINC01978-201ENST00000572353 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
LINC01978-201ENST00000572353 EEA1Q15075 1411 aa20.14■□□□□ 0.81
LINC01978-201ENST00000572353 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
LINC01978-201ENST00000572353 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
LINC01978-201ENST00000572353 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
LINC01978-201ENST00000572353 CUX2O14529 1486 aa20.08■□□□□ 0.81
LINC01978-201ENST00000572353 KIF27Q86VH2 1401 aa20.05■□□□□ 0.8
LINC01978-201ENST00000572353 WDR62O43379 1518 aa20.03■□□□□ 0.8
LINC01978-201ENST00000572353 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
LINC01978-201ENST00000572353 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
LINC01978-201ENST00000572353 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
LINC01978-201ENST00000572353 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
LINC01978-201ENST00000572353 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
LINC01978-201ENST00000572353 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
LINC01978-201ENST00000572353 KIF21BO75037 1637 aa19.91■□□□□ 0.78
LINC01978-201ENST00000572353 IGF1RP08069 1367 aa19.91■□□□□ 0.78
LINC01978-201ENST00000572353 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
LINC01978-201ENST00000572353 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
LINC01978-201ENST00000572353 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
LINC01978-201ENST00000572353 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
LINC01978-201ENST00000572353 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
LINC01978-201ENST00000572353 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
LINC01978-201ENST00000572353 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
LINC01978-201ENST00000572353 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
LINC01978-201ENST00000572353 AQRO60306 1485 aaKnown RBP eCLIP19.81■□□□□ 0.76
LINC01978-201ENST00000572353 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
LINC01978-201ENST00000572353 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
LINC01978-201ENST00000572353 CEP162Q5TB80 1403 aa19.74■□□□□ 0.75
LINC01978-201ENST00000572353 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
LINC01978-201ENST00000572353 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
LINC01978-201ENST00000572353 CUL7Q14999 1698 aa19.7■□□□□ 0.74
LINC01978-201ENST00000572353 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
LINC01978-201ENST00000572353 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
LINC01978-201ENST00000572353 ADAMTS12P58397 1594 aa19.63■□□□□ 0.73
LINC01978-201ENST00000572353 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
LINC01978-201ENST00000572353 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
LINC01978-201ENST00000572353 CLIP1P30622 1438 aa19.61■□□□□ 0.73
LINC01978-201ENST00000572353 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
LINC01978-201ENST00000572353 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
LINC01978-201ENST00000572353 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
LINC01978-201ENST00000572353 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms