RNA–Protein interactions for RNA: ENST00000572298.5

TOM1L1-211, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-211ENST00000572298 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
TOM1L1-211ENST00000572298 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
TOM1L1-211ENST00000572298 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
TOM1L1-211ENST00000572298 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
TOM1L1-211ENST00000572298 ABCC9O60706 1549 aa18.37■□□□□ 0.53
TOM1L1-211ENST00000572298 DCAF8L2P0C7V8 631 aa17.85■□□□□ 0.45
TOM1L1-211ENST00000572298 NACADO15069 1562 aa17.78■□□□□ 0.44
TOM1L1-211ENST00000572298 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
TOM1L1-211ENST00000572298 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
TOM1L1-211ENST00000572298 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
TOM1L1-211ENST00000572298 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
TOM1L1-211ENST00000572298 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
TOM1L1-211ENST00000572298 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
TOM1L1-211ENST00000572298 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
TOM1L1-211ENST00000572298 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
TOM1L1-211ENST00000572298 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
TOM1L1-211ENST00000572298 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
TOM1L1-211ENST00000572298 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
TOM1L1-211ENST00000572298 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
TOM1L1-211ENST00000572298 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
TOM1L1-211ENST00000572298 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
TOM1L1-211ENST00000572298 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
TOM1L1-211ENST00000572298 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
TOM1L1-211ENST00000572298 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
TOM1L1-211ENST00000572298 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
TOM1L1-211ENST00000572298 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
TOM1L1-211ENST00000572298 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
TOM1L1-211ENST00000572298 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
TOM1L1-211ENST00000572298 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
TOM1L1-211ENST00000572298 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
TOM1L1-211ENST00000572298 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
TOM1L1-211ENST00000572298 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
TOM1L1-211ENST00000572298 WIZO95785 1651 aa16.19■□□□□ 0.18
TOM1L1-211ENST00000572298 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
TOM1L1-211ENST00000572298 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
TOM1L1-211ENST00000572298 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
TOM1L1-211ENST00000572298 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
TOM1L1-211ENST00000572298 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
TOM1L1-211ENST00000572298 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
TOM1L1-211ENST00000572298 NESP48681 1621 aa15.89■□□□□ 0.13
TOM1L1-211ENST00000572298 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
TOM1L1-211ENST00000572298 CFTRP13569 1480 aa15.85■□□□□ 0.13
TOM1L1-211ENST00000572298 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
TOM1L1-211ENST00000572298 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
TOM1L1-211ENST00000572298 FOXD1Q16676 465 aa15.7■□□□□ 0.1
TOM1L1-211ENST00000572298 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
TOM1L1-211ENST00000572298 CUX2O14529 1486 aa15.68■□□□□ 0.1
TOM1L1-211ENST00000572298 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
TOM1L1-211ENST00000572298 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
TOM1L1-211ENST00000572298 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
TOM1L1-211ENST00000572298 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
TOM1L1-211ENST00000572298 WDR62O43379 1518 aa15.57■□□□□ 0.08
TOM1L1-211ENST00000572298 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
TOM1L1-211ENST00000572298 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
TOM1L1-211ENST00000572298 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
TOM1L1-211ENST00000572298 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
TOM1L1-211ENST00000572298 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
TOM1L1-211ENST00000572298 CUX1P39880 1505 aa15.37■□□□□ 0.05
TOM1L1-211ENST00000572298 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
TOM1L1-211ENST00000572298 SOGA1O94964 1423 aa15.34■□□□□ 0.05
TOM1L1-211ENST00000572298 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
TOM1L1-211ENST00000572298 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
TOM1L1-211ENST00000572298 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
TOM1L1-211ENST00000572298 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
TOM1L1-211ENST00000572298 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
TOM1L1-211ENST00000572298 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
TOM1L1-211ENST00000572298 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
TOM1L1-211ENST00000572298 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
TOM1L1-211ENST00000572298 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.02
TOM1L1-211ENST00000572298 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
TOM1L1-211ENST00000572298 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
TOM1L1-211ENST00000572298 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
TOM1L1-211ENST00000572298 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
TOM1L1-211ENST00000572298 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
TOM1L1-211ENST00000572298 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
TOM1L1-211ENST00000572298 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
TOM1L1-211ENST00000572298 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
TOM1L1-211ENST00000572298 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
TOM1L1-211ENST00000572298 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
TOM1L1-211ENST00000572298 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
TOM1L1-211ENST00000572298 FBLN2P98095 1184 aa15.07■□□□□ 0
TOM1L1-211ENST00000572298 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
TOM1L1-211ENST00000572298 SNAPC4Q5SXM2 1469 aa15.06■□□□□ 0
TOM1L1-211ENST00000572298 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
TOM1L1-211ENST00000572298 PBRM1Q86U86 1689 aa15.03■□□□□ -0
TOM1L1-211ENST00000572298 SYNJ2O15056 1496 aa15.02■□□□□ -0
TOM1L1-211ENST00000572298 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
TOM1L1-211ENST00000572298 IGF1RP08069 1367 aa14.98□□□□□ -0.01
TOM1L1-211ENST00000572298 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
TOM1L1-211ENST00000572298 CHD1O14646 1710 aa14.95□□□□□ -0.02
TOM1L1-211ENST00000572298 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
TOM1L1-211ENST00000572298 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
TOM1L1-211ENST00000572298 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
TOM1L1-211ENST00000572298 CUL7Q14999 1698 aa14.9□□□□□ -0.02
TOM1L1-211ENST00000572298 EEA1Q15075 1411 aa14.89□□□□□ -0.03
TOM1L1-211ENST00000572298 NUP160Q12769 1436 aa14.85□□□□□ -0.03
TOM1L1-211ENST00000572298 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
TOM1L1-211ENST00000572298 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
TOM1L1-211ENST00000572298 MSH5O43196 834 aa14.84□□□□□ -0.03
TOM1L1-211ENST00000572298 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms