RNA–Protein interactions for RNA: ENST00000571157.1

MRM3-202, Transcript of mitochondrial rRNA methyltransferase 3, humanhuman

TSL 1 (best)

Gene MRM3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3-202ENST00000571157 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
MRM3-202ENST00000571157 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
MRM3-202ENST00000571157 ABCC9O60706 1549 aa20.6■□□□□ 0.89
MRM3-202ENST00000571157 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
MRM3-202ENST00000571157 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
MRM3-202ENST00000571157 NACADO15069 1562 aa20.04■□□□□ 0.8
MRM3-202ENST00000571157 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
MRM3-202ENST00000571157 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
MRM3-202ENST00000571157 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
MRM3-202ENST00000571157 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
MRM3-202ENST00000571157 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
MRM3-202ENST00000571157 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
MRM3-202ENST00000571157 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
MRM3-202ENST00000571157 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
MRM3-202ENST00000571157 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
MRM3-202ENST00000571157 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
MRM3-202ENST00000571157 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
MRM3-202ENST00000571157 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
MRM3-202ENST00000571157 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
MRM3-202ENST00000571157 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
MRM3-202ENST00000571157 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
MRM3-202ENST00000571157 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
MRM3-202ENST00000571157 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
MRM3-202ENST00000571157 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
MRM3-202ENST00000571157 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
MRM3-202ENST00000571157 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
MRM3-202ENST00000571157 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
MRM3-202ENST00000571157 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
MRM3-202ENST00000571157 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
MRM3-202ENST00000571157 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
MRM3-202ENST00000571157 WIZO95785 1651 aa18.3■□□□□ 0.52
MRM3-202ENST00000571157 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
MRM3-202ENST00000571157 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
MRM3-202ENST00000571157 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
MRM3-202ENST00000571157 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
MRM3-202ENST00000571157 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
MRM3-202ENST00000571157 CFTRP13569 1480 aa17.88■□□□□ 0.45
MRM3-202ENST00000571157 NESP48681 1621 aa17.87■□□□□ 0.45
MRM3-202ENST00000571157 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
MRM3-202ENST00000571157 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
MRM3-202ENST00000571157 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
MRM3-202ENST00000571157 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
MRM3-202ENST00000571157 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
MRM3-202ENST00000571157 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
MRM3-202ENST00000571157 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
MRM3-202ENST00000571157 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
MRM3-202ENST00000571157 CUX2O14529 1486 aa17.6■□□□□ 0.41
MRM3-202ENST00000571157 WDR62O43379 1518 aa17.57■□□□□ 0.4
MRM3-202ENST00000571157 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
MRM3-202ENST00000571157 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
MRM3-202ENST00000571157 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
MRM3-202ENST00000571157 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
MRM3-202ENST00000571157 CUX1P39880 1505 aa17.37■□□□□ 0.37
MRM3-202ENST00000571157 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
MRM3-202ENST00000571157 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
MRM3-202ENST00000571157 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
MRM3-202ENST00000571157 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
MRM3-202ENST00000571157 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
MRM3-202ENST00000571157 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
MRM3-202ENST00000571157 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
MRM3-202ENST00000571157 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
MRM3-202ENST00000571157 SOGA1O94964 1423 aa17.23■□□□□ 0.35
MRM3-202ENST00000571157 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
MRM3-202ENST00000571157 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
MRM3-202ENST00000571157 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
MRM3-202ENST00000571157 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
MRM3-202ENST00000571157 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
MRM3-202ENST00000571157 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
MRM3-202ENST00000571157 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.321e-7■■■■■ 38.9
MRM3-202ENST00000571157 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
MRM3-202ENST00000571157 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
MRM3-202ENST00000571157 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
MRM3-202ENST00000571157 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
MRM3-202ENST00000571157 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
MRM3-202ENST00000571157 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
MRM3-202ENST00000571157 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
MRM3-202ENST00000571157 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
MRM3-202ENST00000571157 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
MRM3-202ENST00000571157 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
MRM3-202ENST00000571157 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
MRM3-202ENST00000571157 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
MRM3-202ENST00000571157 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
MRM3-202ENST00000571157 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
MRM3-202ENST00000571157 CUL7Q14999 1698 aa16.86■□□□□ 0.29
MRM3-202ENST00000571157 CHD1O14646 1710 aa16.86■□□□□ 0.29
MRM3-202ENST00000571157 IGF1RP08069 1367 aa16.86■□□□□ 0.29
MRM3-202ENST00000571157 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
MRM3-202ENST00000571157 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
MRM3-202ENST00000571157 EEA1Q15075 1411 aa16.83■□□□□ 0.28
MRM3-202ENST00000571157 FBLN2P98095 1184 aa16.81■□□□□ 0.28
MRM3-202ENST00000571157 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
MRM3-202ENST00000571157 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
MRM3-202ENST00000571157 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
MRM3-202ENST00000571157 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
MRM3-202ENST00000571157 NUP160Q12769 1436 aa16.74■□□□□ 0.27
MRM3-202ENST00000571157 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
MRM3-202ENST00000571157 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
MRM3-202ENST00000571157 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
MRM3-202ENST00000571157 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
MRM3-202ENST00000571157 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms