RNA–Protein interactions for RNA: ENST00000571079.1

FXR2-202, Transcript of FMR1 autosomal homolog 2, humanhuman

TSL 4

Gene FXR2, Length 462 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-202ENST00000571079 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
FXR2-202ENST00000571079 ABCC9O60706 1549 aa22.31■■□□□ 1.16
FXR2-202ENST00000571079 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
FXR2-202ENST00000571079 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
FXR2-202ENST00000571079 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
FXR2-202ENST00000571079 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
FXR2-202ENST00000571079 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
FXR2-202ENST00000571079 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
FXR2-202ENST00000571079 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
FXR2-202ENST00000571079 NACADO15069 1562 aa20.12■□□□□ 0.81
FXR2-202ENST00000571079 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
FXR2-202ENST00000571079 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
FXR2-202ENST00000571079 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
FXR2-202ENST00000571079 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
FXR2-202ENST00000571079 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
FXR2-202ENST00000571079 CUX2O14529 1486 aa19.42■□□□□ 0.7
FXR2-202ENST00000571079 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
FXR2-202ENST00000571079 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
FXR2-202ENST00000571079 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
FXR2-202ENST00000571079 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
FXR2-202ENST00000571079 NESP48681 1621 aa18.89■□□□□ 0.62
FXR2-202ENST00000571079 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
FXR2-202ENST00000571079 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
FXR2-202ENST00000571079 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
FXR2-202ENST00000571079 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
FXR2-202ENST00000571079 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
FXR2-202ENST00000571079 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
FXR2-202ENST00000571079 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
FXR2-202ENST00000571079 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
FXR2-202ENST00000571079 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
FXR2-202ENST00000571079 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
FXR2-202ENST00000571079 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
FXR2-202ENST00000571079 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
FXR2-202ENST00000571079 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
FXR2-202ENST00000571079 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
FXR2-202ENST00000571079 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
FXR2-202ENST00000571079 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
FXR2-202ENST00000571079 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
FXR2-202ENST00000571079 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
FXR2-202ENST00000571079 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
FXR2-202ENST00000571079 WDR62O43379 1518 aa18.23■□□□□ 0.51
FXR2-202ENST00000571079 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
FXR2-202ENST00000571079 CYB5RLQ6IPT4 315 aa18.22■□□□□ 0.51
FXR2-202ENST00000571079 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
FXR2-202ENST00000571079 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
FXR2-202ENST00000571079 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
FXR2-202ENST00000571079 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
FXR2-202ENST00000571079 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
FXR2-202ENST00000571079 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
FXR2-202ENST00000571079 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
FXR2-202ENST00000571079 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
FXR2-202ENST00000571079 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
FXR2-202ENST00000571079 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
FXR2-202ENST00000571079 CHD1O14646 1710 aa17.8■□□□□ 0.44
FXR2-202ENST00000571079 FBLN2P98095 1184 aa17.71■□□□□ 0.43
FXR2-202ENST00000571079 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
FXR2-202ENST00000571079 WIZO95785 1651 aa17.63■□□□□ 0.41
FXR2-202ENST00000571079 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
FXR2-202ENST00000571079 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
FXR2-202ENST00000571079 CFTRP13569 1480 aa17.58■□□□□ 0.41
FXR2-202ENST00000571079 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
FXR2-202ENST00000571079 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
FXR2-202ENST00000571079 KDM4FA0A1W2PPD8 638 aa17.44■□□□□ 0.38
FXR2-202ENST00000571079 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
FXR2-202ENST00000571079 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
FXR2-202ENST00000571079 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
FXR2-202ENST00000571079 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
FXR2-202ENST00000571079 KIF13AQ9H1H9 1805 aa17.33■□□□□ 0.37
FXR2-202ENST00000571079 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
FXR2-202ENST00000571079 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
FXR2-202ENST00000571079 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
FXR2-202ENST00000571079 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
FXR2-202ENST00000571079 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
FXR2-202ENST00000571079 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
FXR2-202ENST00000571079 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
FXR2-202ENST00000571079 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
FXR2-202ENST00000571079 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
FXR2-202ENST00000571079 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
FXR2-202ENST00000571079 HECW2Q9P2P5 1572 aa17.15■□□□□ 0.34
FXR2-202ENST00000571079 KDM6BO15054 1643 aa17.1■□□□□ 0.33
FXR2-202ENST00000571079 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
FXR2-202ENST00000571079 SOGA1O94964 1423 aa17.09■□□□□ 0.33
FXR2-202ENST00000571079 TSPOAP1O95153 1857 aa17.08■□□□□ 0.33
FXR2-202ENST00000571079 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
FXR2-202ENST00000571079 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
FXR2-202ENST00000571079 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
FXR2-202ENST00000571079 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
FXR2-202ENST00000571079 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
FXR2-202ENST00000571079 GRIN2BQ13224 1484 aa17.02■□□□□ 0.32
FXR2-202ENST00000571079 LMTK3Q96Q04 1460 aa17.02■□□□□ 0.32
FXR2-202ENST00000571079 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
FXR2-202ENST00000571079 CEP170Q5SW79 1584 aa17■□□□□ 0.31
FXR2-202ENST00000571079 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
FXR2-202ENST00000571079 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
FXR2-202ENST00000571079 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
FXR2-202ENST00000571079 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
FXR2-202ENST00000571079 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
FXR2-202ENST00000571079 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
FXR2-202ENST00000571079 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
FXR2-202ENST00000571079 SOCS7O14512 581 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms