RNA–Protein interactions for RNA: ENST00000571022.5

ABR-209, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-209ENST00000571022 NISCHQ9Y2I1 1504 aa12.06□□□□□ -0.48
ABR-209ENST00000571022 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
ABR-209ENST00000571022 ABCC9O60706 1549 aa10.23□□□□□ -0.77
ABR-209ENST00000571022 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
ABR-209ENST00000571022 DCAF1Q9Y4B6 1507 aa9.96□□□□□ -0.82
ABR-209ENST00000571022 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
ABR-209ENST00000571022 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
ABR-209ENST00000571022 NACADO15069 1562 aa9.9□□□□□ -0.82
ABR-209ENST00000571022 RB1CC1Q8TDY2 1594 aa9.85□□□□□ -0.83
ABR-209ENST00000571022 SCRIBQ14160 1630 aa9.73□□□□□ -0.85
ABR-209ENST00000571022 UNC13AQ9UPW8 1703 aa9.71□□□□□ -0.85
ABR-209ENST00000571022 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
ABR-209ENST00000571022 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
ABR-209ENST00000571022 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
ABR-209ENST00000571022 CECR2Q9BXF3 1484 aa9.45□□□□□ -0.9
ABR-209ENST00000571022 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
ABR-209ENST00000571022 EIF4G1Q04637 1599 aaKnown RBP9.33□□□□□ -0.92
ABR-209ENST00000571022 SMARCA4P51532 1647 aa9.31□□□□□ -0.92
ABR-209ENST00000571022 DNAJC5BQ9UF47 199 aa9.31□□□□□ -0.92
ABR-209ENST00000571022 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
ABR-209ENST00000571022 BAZ1AQ9NRL2 1556 aaPredicted RBP9.29□□□□□ -0.92
ABR-209ENST00000571022 CC2D2AQ9P2K1 1620 aa9.25□□□□□ -0.93
ABR-209ENST00000571022 WIZO95785 1651 aa9.23□□□□□ -0.93
ABR-209ENST00000571022 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
ABR-209ENST00000571022 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
ABR-209ENST00000571022 NCAPD3P42695 1498 aa9.17□□□□□ -0.94
ABR-209ENST00000571022 SUPT5HO00267 1087 aaKnown RBP9.17□□□□□ -0.94
ABR-209ENST00000571022 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
ABR-209ENST00000571022 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
ABR-209ENST00000571022 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
ABR-209ENST00000571022 BAZ1BQ9UIG0 1483 aaKnown RBP9.11□□□□□ -0.95
ABR-209ENST00000571022 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
ABR-209ENST00000571022 NESP48681 1621 aa8.96□□□□□ -0.98
ABR-209ENST00000571022 CFTRP13569 1480 aa8.91□□□□□ -0.98
ABR-209ENST00000571022 CADPSQ9ULU8 1353 aa8.9□□□□□ -0.98
ABR-209ENST00000571022 LAMC3Q9Y6N6 1575 aa8.85□□□□□ -0.99
ABR-209ENST00000571022 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
ABR-209ENST00000571022 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
ABR-209ENST00000571022 PRDM2Q13029 1718 aa8.8□□□□□ -1
ABR-209ENST00000571022 ABCC8Q09428 1581 aa8.79□□□□□ -1
ABR-209ENST00000571022 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
ABR-209ENST00000571022 URB2Q14146 1524 aaKnown RBP8.76□□□□□ -1.01
ABR-209ENST00000571022 CEP164Q9UPV0 1460 aa8.75□□□□□ -1.01
ABR-209ENST00000571022 CUX1P39880 1505 aa8.75□□□□□ -1.01
ABR-209ENST00000571022 THOC2Q8NI27 1593 aaKnown RBP8.74□□□□□ -1.01
ABR-209ENST00000571022 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
ABR-209ENST00000571022 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
ABR-209ENST00000571022 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.01
ABR-209ENST00000571022 MRC2Q9UBG0 1479 aa8.71□□□□□ -1.01
ABR-209ENST00000571022 CHIC1Q5VXU3 224 aa8.71□□□□□ -1.02
ABR-209ENST00000571022 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
ABR-209ENST00000571022 WDR62O43379 1518 aa8.7□□□□□ -1.02
ABR-209ENST00000571022 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
ABR-209ENST00000571022 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
ABR-209ENST00000571022 CUX2O14529 1486 aa8.67□□□□□ -1.02
ABR-209ENST00000571022 BIVM-ERCC5R4GMW8 1640 aa8.67□□□□□ -1.02
ABR-209ENST00000571022 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
ABR-209ENST00000571022 FGD5Q6ZNL6 1462 aa8.65□□□□□ -1.02
ABR-209ENST00000571022 RAD54L2Q9Y4B4 1467 aa8.64□□□□□ -1.03
ABR-209ENST00000571022 TARBP1Q13395 1621 aaKnown RBP8.61□□□□□ -1.03
ABR-209ENST00000571022 RUSC2Q8N2Y8 1516 aa8.6□□□□□ -1.03
ABR-209ENST00000571022 ZNF608Q9ULD9 1512 aaPredicted RBP8.59□□□□□ -1.03
ABR-209ENST00000571022 TRIM41Q8WV44 630 aa8.59□□□□□ -1.03
ABR-209ENST00000571022 WDR97A6NE52 1622 aa8.58□□□□□ -1.04
ABR-209ENST00000571022 SOGA1O94964 1423 aa8.58□□□□□ -1.04
ABR-209ENST00000571022 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
ABR-209ENST00000571022 IFT140Q96RY7 1462 aa8.56□□□□□ -1.04
ABR-209ENST00000571022 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
ABR-209ENST00000571022 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
ABR-209ENST00000571022 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
ABR-209ENST00000571022 EIF4G3O43432 1585 aaKnown RBP8.52□□□□□ -1.05
ABR-209ENST00000571022 IGF1RP08069 1367 aa8.49□□□□□ -1.05
ABR-209ENST00000571022 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
ABR-209ENST00000571022 FAM9AQ8IZU1 332 aaPredicted RBP8.48□□□□□ -1.05
ABR-209ENST00000571022 KIF27Q86VH2 1401 aa8.47□□□□□ -1.05
ABR-209ENST00000571022 PBRM1Q86U86 1689 aa8.45□□□□□ -1.06
ABR-209ENST00000571022 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
ABR-209ENST00000571022 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
ABR-209ENST00000571022 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
ABR-209ENST00000571022 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
ABR-209ENST00000571022 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
ABR-209ENST00000571022 ADAMTS12P58397 1594 aa8.43□□□□□ -1.06
ABR-209ENST00000571022 EEA1Q15075 1411 aa8.42□□□□□ -1.06
ABR-209ENST00000571022 RAPGEF2Q9Y4G8 1499 aa8.41□□□□□ -1.06
ABR-209ENST00000571022 CARMIL1Q5VZK9 1371 aa8.4□□□□□ -1.06
ABR-209ENST00000571022 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
ABR-209ENST00000571022 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
ABR-209ENST00000571022 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
ABR-209ENST00000571022 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
ABR-209ENST00000571022 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ABR-209ENST00000571022 KIF21BO75037 1637 aa8.37□□□□□ -1.07
ABR-209ENST00000571022 EHMT2Q96KQ7 1210 aa8.37□□□□□ -1.07
ABR-209ENST00000571022 GRIN2AQ12879 1464 aa8.37□□□□□ -1.07
ABR-209ENST00000571022 CHD1O14646 1710 aa8.36□□□□□ -1.07
ABR-209ENST00000571022 CEP170Q5SW79 1584 aa8.35□□□□□ -1.07
ABR-209ENST00000571022 NUP160Q12769 1436 aa8.34□□□□□ -1.07
ABR-209ENST00000571022 GOLGA3Q08378 1498 aa8.32□□□□□ -1.08
ABR-209ENST00000571022 FBLN2P98095 1184 aa8.32□□□□□ -1.08
ABR-209ENST00000571022 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
ABR-209ENST00000571022 CLASP1Q7Z460 1538 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms