RNA–Protein interactions for RNA: ENST00000570742.1

TRPV1-205, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 3

Gene TRPV1, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-205ENST00000570742 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
TRPV1-205ENST00000570742 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
TRPV1-205ENST00000570742 ABCC9O60706 1549 aa32.11■■■□□ 2.73
TRPV1-205ENST00000570742 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
TRPV1-205ENST00000570742 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
TRPV1-205ENST00000570742 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
TRPV1-205ENST00000570742 NACADO15069 1562 aa31.43■■■□□ 2.62
TRPV1-205ENST00000570742 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
TRPV1-205ENST00000570742 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
TRPV1-205ENST00000570742 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
TRPV1-205ENST00000570742 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
TRPV1-205ENST00000570742 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
TRPV1-205ENST00000570742 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
TRPV1-205ENST00000570742 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
TRPV1-205ENST00000570742 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.29
TRPV1-205ENST00000570742 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
TRPV1-205ENST00000570742 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
TRPV1-205ENST00000570742 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
TRPV1-205ENST00000570742 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
TRPV1-205ENST00000570742 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
TRPV1-205ENST00000570742 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
TRPV1-205ENST00000570742 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
TRPV1-205ENST00000570742 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
TRPV1-205ENST00000570742 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
TRPV1-205ENST00000570742 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
TRPV1-205ENST00000570742 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
TRPV1-205ENST00000570742 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
TRPV1-205ENST00000570742 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
TRPV1-205ENST00000570742 WIZO95785 1651 aa28.74■■■□□ 2.19
TRPV1-205ENST00000570742 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
TRPV1-205ENST00000570742 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
TRPV1-205ENST00000570742 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
TRPV1-205ENST00000570742 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
TRPV1-205ENST00000570742 LAMC3Q9Y6N6 1575 aa28.12■■■□□ 2.09
TRPV1-205ENST00000570742 CFTRP13569 1480 aa28.07■■■□□ 2.08
TRPV1-205ENST00000570742 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
TRPV1-205ENST00000570742 NESP48681 1621 aa27.88■■■□□ 2.05
TRPV1-205ENST00000570742 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
TRPV1-205ENST00000570742 ERCC6Q03468 1493 aa27.76■■■□□ 2.04
TRPV1-205ENST00000570742 FANCD2Q9BXW9 1451 aa27.76■■■□□ 2.03
TRPV1-205ENST00000570742 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
TRPV1-205ENST00000570742 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
TRPV1-205ENST00000570742 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
TRPV1-205ENST00000570742 MRC2Q9UBG0 1479 aa27.55■■■□□ 2
TRPV1-205ENST00000570742 WDR62O43379 1518 aa27.41■■□□□ 1.98
TRPV1-205ENST00000570742 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
TRPV1-205ENST00000570742 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.97
TRPV1-205ENST00000570742 CUX2O14529 1486 aa27.38■■□□□ 1.97
TRPV1-205ENST00000570742 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
TRPV1-205ENST00000570742 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
TRPV1-205ENST00000570742 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
TRPV1-205ENST00000570742 CUX1P39880 1505 aa27.26■■□□□ 1.95
TRPV1-205ENST00000570742 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
TRPV1-205ENST00000570742 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
TRPV1-205ENST00000570742 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
TRPV1-205ENST00000570742 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
TRPV1-205ENST00000570742 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
TRPV1-205ENST00000570742 SOGA1O94964 1423 aa27.12■■□□□ 1.93
TRPV1-205ENST00000570742 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
TRPV1-205ENST00000570742 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
TRPV1-205ENST00000570742 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
TRPV1-205ENST00000570742 WDR97A6NE52 1622 aa27.02■■□□□ 1.92
TRPV1-205ENST00000570742 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
TRPV1-205ENST00000570742 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
TRPV1-205ENST00000570742 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
TRPV1-205ENST00000570742 KIF27Q86VH2 1401 aa26.85■■□□□ 1.89
TRPV1-205ENST00000570742 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
TRPV1-205ENST00000570742 GAPVD1Q14C86 1478 aa26.8■■□□□ 1.88
TRPV1-205ENST00000570742 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
TRPV1-205ENST00000570742 EEA1Q15075 1411 aa26.77■■□□□ 1.88
TRPV1-205ENST00000570742 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.877e-6■■□□□ 13.1
TRPV1-205ENST00000570742 GRIN2BQ13224 1484 aa26.76■■□□□ 1.87
TRPV1-205ENST00000570742 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
TRPV1-205ENST00000570742 EIF4G3O43432 1585 aaKnown RBP26.73■■□□□ 1.87
TRPV1-205ENST00000570742 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
TRPV1-205ENST00000570742 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
TRPV1-205ENST00000570742 IGF1RP08069 1367 aa26.62■■□□□ 1.85
TRPV1-205ENST00000570742 PBRM1Q86U86 1689 aa26.58■■□□□ 1.85
TRPV1-205ENST00000570742 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
TRPV1-205ENST00000570742 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
TRPV1-205ENST00000570742 CUL7Q14999 1698 aa26.53■■□□□ 1.84
TRPV1-205ENST00000570742 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
TRPV1-205ENST00000570742 CHMP7Q8WUX9 453 aaPredicted RBP26.52■■□□□ 1.84
TRPV1-205ENST00000570742 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
TRPV1-205ENST00000570742 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
TRPV1-205ENST00000570742 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
TRPV1-205ENST00000570742 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
TRPV1-205ENST00000570742 FBLN2P98095 1184 aa26.4■■□□□ 1.82
TRPV1-205ENST00000570742 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.82
TRPV1-205ENST00000570742 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
TRPV1-205ENST00000570742 PRXQ9BXM0 1461 aa26.38■■□□□ 1.81
TRPV1-205ENST00000570742 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
TRPV1-205ENST00000570742 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
TRPV1-205ENST00000570742 CHD1O14646 1710 aa26.26■■□□□ 1.79
TRPV1-205ENST00000570742 KIF21BO75037 1637 aa26.26■■□□□ 1.79
TRPV1-205ENST00000570742 NUP160Q12769 1436 aa26.23■■□□□ 1.79
TRPV1-205ENST00000570742 KIAA0586Q9BVV6 1533 aa26.18■■□□□ 1.78
TRPV1-205ENST00000570742 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
TRPV1-205ENST00000570742 UBTFP17480 764 aaKnown RBP26.1■■□□□ 1.77
TRPV1-205ENST00000570742 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms