RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
TVP23A-203ENST00000570692 ABCC9O60706 1549 aa36.25■■■■□ 3.39
TVP23A-203ENST00000570692 CCDC180Q9P1Z9 1646 aa35.45■■■■□ 3.27
TVP23A-203ENST00000570692 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
TVP23A-203ENST00000570692 RB1CC1Q8TDY2 1594 aa34.11■■■■□ 3.05
TVP23A-203ENST00000570692 NACADO15069 1562 aa33.71■■■□□ 2.99
TVP23A-203ENST00000570692 PABPN1Q86U42 306 aaKnown RBP eCLIP33.7■■■□□ 2.99
TVP23A-203ENST00000570692 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
TVP23A-203ENST00000570692 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
TVP23A-203ENST00000570692 BICRAQ9NZM4 1560 aa33.2■■■□□ 2.91
TVP23A-203ENST00000570692 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
TVP23A-203ENST00000570692 CECR2Q9BXF3 1484 aa32.7■■■□□ 2.83
TVP23A-203ENST00000570692 CC2D2AQ9P2K1 1620 aa32.66■■■□□ 2.82
TVP23A-203ENST00000570692 SHROOM4Q9ULL8 1493 aa32.58■■■□□ 2.81
TVP23A-203ENST00000570692 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
TVP23A-203ENST00000570692 ZCCHC6Q5VYS8 1495 aaKnown RBP32.4■■■□□ 2.78
TVP23A-203ENST00000570692 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
TVP23A-203ENST00000570692 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
TVP23A-203ENST00000570692 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
TVP23A-203ENST00000570692 CUX2O14529 1486 aa31.43■■■□□ 2.62
TVP23A-203ENST00000570692 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
TVP23A-203ENST00000570692 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
TVP23A-203ENST00000570692 ATAD2BQ9ULI0 1458 aa31■■■□□ 2.55
TVP23A-203ENST00000570692 NESP48681 1621 aa30.96■■■□□ 2.55
TVP23A-203ENST00000570692 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
TVP23A-203ENST00000570692 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
TVP23A-203ENST00000570692 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
TVP23A-203ENST00000570692 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
TVP23A-203ENST00000570692 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
TVP23A-203ENST00000570692 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
TVP23A-203ENST00000570692 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
TVP23A-203ENST00000570692 BAZ1AQ9NRL2 1556 aaPredicted RBP30.5■■■□□ 2.47
TVP23A-203ENST00000570692 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
TVP23A-203ENST00000570692 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
TVP23A-203ENST00000570692 PDS5BQ9NTI5 1447 aa30.41■■■□□ 2.46
TVP23A-203ENST00000570692 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
TVP23A-203ENST00000570692 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
TVP23A-203ENST00000570692 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
TVP23A-203ENST00000570692 WDR62O43379 1518 aa30.13■■■□□ 2.41
TVP23A-203ENST00000570692 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
TVP23A-203ENST00000570692 OSCARQ8IYS5 282 aa29.94■■■□□ 2.38
TVP23A-203ENST00000570692 WIZO95785 1651 aa29.88■■■□□ 2.37
TVP23A-203ENST00000570692 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
TVP23A-203ENST00000570692 CFTRP13569 1480 aa29.71■■■□□ 2.35
TVP23A-203ENST00000570692 URB2Q14146 1524 aaKnown RBP29.69■■■□□ 2.34
TVP23A-203ENST00000570692 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
TVP23A-203ENST00000570692 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
TVP23A-203ENST00000570692 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
TVP23A-203ENST00000570692 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
TVP23A-203ENST00000570692 ZNF608Q9ULD9 1512 aaPredicted RBP29.45■■■□□ 2.3
TVP23A-203ENST00000570692 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
TVP23A-203ENST00000570692 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
TVP23A-203ENST00000570692 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
TVP23A-203ENST00000570692 CYB5RLQ6IPT4 315 aa29.34■■■□□ 2.29
TVP23A-203ENST00000570692 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
TVP23A-203ENST00000570692 TRHP20396 242 aaPredicted RBP29.23■■■□□ 2.27
TVP23A-203ENST00000570692 TOPBP1Q92547 1522 aa29.23■■■□□ 2.27
TVP23A-203ENST00000570692 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
TVP23A-203ENST00000570692 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
TVP23A-203ENST00000570692 ARAP1Q96P48 1450 aa29.13■■■□□ 2.25
TVP23A-203ENST00000570692 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.25
TVP23A-203ENST00000570692 CHD1O14646 1710 aa29.08■■■□□ 2.25
TVP23A-203ENST00000570692 FBLN2P98095 1184 aa29.07■■■□□ 2.24
TVP23A-203ENST00000570692 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
TVP23A-203ENST00000570692 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
TVP23A-203ENST00000570692 TARBP1Q13395 1621 aaKnown RBP29■■■□□ 2.23
TVP23A-203ENST00000570692 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
TVP23A-203ENST00000570692 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
TVP23A-203ENST00000570692 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
TVP23A-203ENST00000570692 TDRD9Q8NDG6 1382 aaKnown RBP28.83■■■□□ 2.21
TVP23A-203ENST00000570692 SOGA1O94964 1423 aa28.77■■■□□ 2.2
TVP23A-203ENST00000570692 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
TVP23A-203ENST00000570692 SNAPC4Q5SXM2 1469 aa28.75■■■□□ 2.19
TVP23A-203ENST00000570692 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
TVP23A-203ENST00000570692 SYNJ1O43426 1573 aa28.65■■■□□ 2.18
TVP23A-203ENST00000570692 FGD5Q6ZNL6 1462 aa28.62■■■□□ 2.17
TVP23A-203ENST00000570692 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
TVP23A-203ENST00000570692 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
TVP23A-203ENST00000570692 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
TVP23A-203ENST00000570692 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
TVP23A-203ENST00000570692 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
TVP23A-203ENST00000570692 CUX1P39880 1505 aa28.49■■■□□ 2.15
TVP23A-203ENST00000570692 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
TVP23A-203ENST00000570692 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.12
TVP23A-203ENST00000570692 ABCA5Q8WWZ7 1642 aa28.23■■■□□ 2.11
TVP23A-203ENST00000570692 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
TVP23A-203ENST00000570692 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
TVP23A-203ENST00000570692 CEP170Q5SW79 1584 aa28.16■■■□□ 2.1
TVP23A-203ENST00000570692 NUP160Q12769 1436 aa28.12■■■□□ 2.09
TVP23A-203ENST00000570692 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
TVP23A-203ENST00000570692 SHROOM2Q13796 1616 aa28.04■■■□□ 2.08
TVP23A-203ENST00000570692 KIF13AQ9H1H9 1805 aa28.03■■■□□ 2.08
TVP23A-203ENST00000570692 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
TVP23A-203ENST00000570692 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
TVP23A-203ENST00000570692 PRG4Q92954 1404 aaPredicted RBP27.94■■■□□ 2.06
TVP23A-203ENST00000570692 FAM69CQ0P6D2 419 aa27.9■■■□□ 2.06
TVP23A-203ENST00000570692 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
TVP23A-203ENST00000570692 ABCC10Q5T3U5 1492 aa27.84■■■□□ 2.05
TVP23A-203ENST00000570692 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
TVP23A-203ENST00000570692 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms