RNA–Protein interactions for RNA: ENST00000570655.1

SRRM2-203, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-203ENST00000570655 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
SRRM2-203ENST00000570655 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
SRRM2-203ENST00000570655 ABCC9O60706 1549 aa18.59■□□□□ 0.57
SRRM2-203ENST00000570655 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
SRRM2-203ENST00000570655 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
SRRM2-203ENST00000570655 NACADO15069 1562 aa17.85■□□□□ 0.45
SRRM2-203ENST00000570655 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
SRRM2-203ENST00000570655 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
SRRM2-203ENST00000570655 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
SRRM2-203ENST00000570655 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
SRRM2-203ENST00000570655 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
SRRM2-203ENST00000570655 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
SRRM2-203ENST00000570655 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
SRRM2-203ENST00000570655 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
SRRM2-203ENST00000570655 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SRRM2-203ENST00000570655 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
SRRM2-203ENST00000570655 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
SRRM2-203ENST00000570655 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
SRRM2-203ENST00000570655 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
SRRM2-203ENST00000570655 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
SRRM2-203ENST00000570655 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
SRRM2-203ENST00000570655 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
SRRM2-203ENST00000570655 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
SRRM2-203ENST00000570655 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
SRRM2-203ENST00000570655 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
SRRM2-203ENST00000570655 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
SRRM2-203ENST00000570655 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
SRRM2-203ENST00000570655 WIZO95785 1651 aa16.31■□□□□ 0.2
SRRM2-203ENST00000570655 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
SRRM2-203ENST00000570655 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
SRRM2-203ENST00000570655 NESP48681 1621 aa16.08■□□□□ 0.17
SRRM2-203ENST00000570655 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
SRRM2-203ENST00000570655 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
SRRM2-203ENST00000570655 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
SRRM2-203ENST00000570655 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
SRRM2-203ENST00000570655 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
SRRM2-203ENST00000570655 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
SRRM2-203ENST00000570655 CFTRP13569 1480 aa15.91■□□□□ 0.14
SRRM2-203ENST00000570655 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
SRRM2-203ENST00000570655 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SRRM2-203ENST00000570655 CUX2O14529 1486 aa15.82■□□□□ 0.12
SRRM2-203ENST00000570655 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
SRRM2-203ENST00000570655 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
SRRM2-203ENST00000570655 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
SRRM2-203ENST00000570655 PRDM2Q13029 1718 aa15.77■□□□□ 0.11
SRRM2-203ENST00000570655 WDR62O43379 1518 aa15.69■□□□□ 0.1
SRRM2-203ENST00000570655 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
SRRM2-203ENST00000570655 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
SRRM2-203ENST00000570655 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
SRRM2-203ENST00000570655 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
SRRM2-203ENST00000570655 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
SRRM2-203ENST00000570655 CUX1P39880 1505 aa15.46■□□□□ 0.07
SRRM2-203ENST00000570655 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
SRRM2-203ENST00000570655 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
SRRM2-203ENST00000570655 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
SRRM2-203ENST00000570655 SOGA1O94964 1423 aa15.4■□□□□ 0.06
SRRM2-203ENST00000570655 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
SRRM2-203ENST00000570655 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
SRRM2-203ENST00000570655 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
SRRM2-203ENST00000570655 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
SRRM2-203ENST00000570655 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.051e-26■■■■□ 23.3
SRRM2-203ENST00000570655 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
SRRM2-203ENST00000570655 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
SRRM2-203ENST00000570655 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
SRRM2-203ENST00000570655 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
SRRM2-203ENST00000570655 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
SRRM2-203ENST00000570655 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
SRRM2-203ENST00000570655 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
SRRM2-203ENST00000570655 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
SRRM2-203ENST00000570655 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
SRRM2-203ENST00000570655 FBLN2P98095 1184 aa15.2■□□□□ 0.02
SRRM2-203ENST00000570655 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
SRRM2-203ENST00000570655 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
SRRM2-203ENST00000570655 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
SRRM2-203ENST00000570655 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
SRRM2-203ENST00000570655 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
SRRM2-203ENST00000570655 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
SRRM2-203ENST00000570655 CHD1O14646 1710 aa15.13■□□□□ 0.01
SRRM2-203ENST00000570655 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
SRRM2-203ENST00000570655 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
SRRM2-203ENST00000570655 KIF27Q86VH2 1401 aa15.07■□□□□ 0
SRRM2-203ENST00000570655 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
SRRM2-203ENST00000570655 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
SRRM2-203ENST00000570655 ADAMTS12P58397 1594 aa15.02■□□□□ -0
SRRM2-203ENST00000570655 IGF1RP08069 1367 aa15□□□□□ -0.01
SRRM2-203ENST00000570655 GRIN2AQ12879 1464 aa15□□□□□ -0.01
SRRM2-203ENST00000570655 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
SRRM2-203ENST00000570655 CUL7Q14999 1698 aa14.93□□□□□ -0.02
SRRM2-203ENST00000570655 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
SRRM2-203ENST00000570655 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
SRRM2-203ENST00000570655 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
SRRM2-203ENST00000570655 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
SRRM2-203ENST00000570655 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
SRRM2-203ENST00000570655 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
SRRM2-203ENST00000570655 NUP160Q12769 1436 aa14.92□□□□□ -0.02
SRRM2-203ENST00000570655 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
SRRM2-203ENST00000570655 CHIC1Q5VXU3 224 aa14.9□□□□□ -0.02
SRRM2-203ENST00000570655 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
SRRM2-203ENST00000570655 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
SRRM2-203ENST00000570655 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms