RNA–Protein interactions for RNA: ENST00000570112.1

MKRN3-205, Transcript of makorin ring finger protein 3, humanhuman

TSL 2

Gene MKRN3, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN3-205ENST00000570112 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
MKRN3-205ENST00000570112 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
MKRN3-205ENST00000570112 ABCC9O60706 1549 aa22.84■■□□□ 1.25
MKRN3-205ENST00000570112 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
MKRN3-205ENST00000570112 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
MKRN3-205ENST00000570112 NACADO15069 1562 aa22.06■■□□□ 1.12
MKRN3-205ENST00000570112 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
MKRN3-205ENST00000570112 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
MKRN3-205ENST00000570112 MYO15BQ96JP2 1530 aa21.97■■□□□ 1.11
MKRN3-205ENST00000570112 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
MKRN3-205ENST00000570112 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
MKRN3-205ENST00000570112 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
MKRN3-205ENST00000570112 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
MKRN3-205ENST00000570112 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
MKRN3-205ENST00000570112 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
MKRN3-205ENST00000570112 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
MKRN3-205ENST00000570112 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
MKRN3-205ENST00000570112 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
MKRN3-205ENST00000570112 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
MKRN3-205ENST00000570112 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
MKRN3-205ENST00000570112 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
MKRN3-205ENST00000570112 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
MKRN3-205ENST00000570112 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
MKRN3-205ENST00000570112 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
MKRN3-205ENST00000570112 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
MKRN3-205ENST00000570112 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
MKRN3-205ENST00000570112 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
MKRN3-205ENST00000570112 WIZO95785 1651 aa20.27■□□□□ 0.84
MKRN3-205ENST00000570112 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
MKRN3-205ENST00000570112 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
MKRN3-205ENST00000570112 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
MKRN3-205ENST00000570112 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
MKRN3-205ENST00000570112 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
MKRN3-205ENST00000570112 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
MKRN3-205ENST00000570112 NESP48681 1621 aa19.75■□□□□ 0.75
MKRN3-205ENST00000570112 CFTRP13569 1480 aa19.69■□□□□ 0.74
MKRN3-205ENST00000570112 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
MKRN3-205ENST00000570112 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
MKRN3-205ENST00000570112 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
MKRN3-205ENST00000570112 CUX2O14529 1486 aa19.58■□□□□ 0.72
MKRN3-205ENST00000570112 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
MKRN3-205ENST00000570112 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
MKRN3-205ENST00000570112 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
MKRN3-205ENST00000570112 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
MKRN3-205ENST00000570112 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
MKRN3-205ENST00000570112 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
MKRN3-205ENST00000570112 WDR62O43379 1518 aa19.32■□□□□ 0.68
MKRN3-205ENST00000570112 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
MKRN3-205ENST00000570112 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
MKRN3-205ENST00000570112 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.67
MKRN3-205ENST00000570112 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
MKRN3-205ENST00000570112 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
MKRN3-205ENST00000570112 CUX1P39880 1505 aa19.19■□□□□ 0.66
MKRN3-205ENST00000570112 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
MKRN3-205ENST00000570112 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
MKRN3-205ENST00000570112 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
MKRN3-205ENST00000570112 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
MKRN3-205ENST00000570112 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
MKRN3-205ENST00000570112 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
MKRN3-205ENST00000570112 SOGA1O94964 1423 aa19.07■□□□□ 0.64
MKRN3-205ENST00000570112 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.63
MKRN3-205ENST00000570112 TRIM41Q8WV44 630 aa19■□□□□ 0.63
MKRN3-205ENST00000570112 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
MKRN3-205ENST00000570112 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
MKRN3-205ENST00000570112 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
MKRN3-205ENST00000570112 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
MKRN3-205ENST00000570112 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
MKRN3-205ENST00000570112 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
MKRN3-205ENST00000570112 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.62
MKRN3-205ENST00000570112 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
MKRN3-205ENST00000570112 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
MKRN3-205ENST00000570112 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
MKRN3-205ENST00000570112 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
MKRN3-205ENST00000570112 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
MKRN3-205ENST00000570112 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
MKRN3-205ENST00000570112 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
MKRN3-205ENST00000570112 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
MKRN3-205ENST00000570112 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
MKRN3-205ENST00000570112 FBLN2P98095 1184 aa18.7■□□□□ 0.58
MKRN3-205ENST00000570112 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
MKRN3-205ENST00000570112 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
MKRN3-205ENST00000570112 IGF1RP08069 1367 aa18.65■□□□□ 0.58
MKRN3-205ENST00000570112 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
MKRN3-205ENST00000570112 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
MKRN3-205ENST00000570112 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
MKRN3-205ENST00000570112 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
MKRN3-205ENST00000570112 EEA1Q15075 1411 aa18.63■□□□□ 0.57
MKRN3-205ENST00000570112 CUL7Q14999 1698 aa18.62■□□□□ 0.57
MKRN3-205ENST00000570112 CHD1O14646 1710 aa18.61■□□□□ 0.57
MKRN3-205ENST00000570112 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
MKRN3-205ENST00000570112 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
MKRN3-205ENST00000570112 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
MKRN3-205ENST00000570112 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
MKRN3-205ENST00000570112 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
MKRN3-205ENST00000570112 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
MKRN3-205ENST00000570112 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
MKRN3-205ENST00000570112 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
MKRN3-205ENST00000570112 PRXQ9BXM0 1461 aa18.46■□□□□ 0.54
MKRN3-205ENST00000570112 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
MKRN3-205ENST00000570112 NUP160Q12769 1436 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms