RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
HCCAT5-201ENST00000569990 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
HCCAT5-201ENST00000569990 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
HCCAT5-201ENST00000569990 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
HCCAT5-201ENST00000569990 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
HCCAT5-201ENST00000569990 ABCC9O60706 1549 aa20.14■□□□□ 0.81
HCCAT5-201ENST00000569990 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
HCCAT5-201ENST00000569990 NACADO15069 1562 aa19.4■□□□□ 0.7
HCCAT5-201ENST00000569990 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
HCCAT5-201ENST00000569990 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
HCCAT5-201ENST00000569990 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
HCCAT5-201ENST00000569990 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
HCCAT5-201ENST00000569990 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
HCCAT5-201ENST00000569990 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
HCCAT5-201ENST00000569990 FOXD1Q16676 465 aa18.88■□□□□ 0.61
HCCAT5-201ENST00000569990 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
HCCAT5-201ENST00000569990 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
HCCAT5-201ENST00000569990 BICRAQ9NZM4 1560 aa18.83■□□□□ 0.6
HCCAT5-201ENST00000569990 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
HCCAT5-201ENST00000569990 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
HCCAT5-201ENST00000569990 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
HCCAT5-201ENST00000569990 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
HCCAT5-201ENST00000569990 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
HCCAT5-201ENST00000569990 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
HCCAT5-201ENST00000569990 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
HCCAT5-201ENST00000569990 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
HCCAT5-201ENST00000569990 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
HCCAT5-201ENST00000569990 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
HCCAT5-201ENST00000569990 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
HCCAT5-201ENST00000569990 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
HCCAT5-201ENST00000569990 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
HCCAT5-201ENST00000569990 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
HCCAT5-201ENST00000569990 MSH5O43196 834 aa17.81■□□□□ 0.44
HCCAT5-201ENST00000569990 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
HCCAT5-201ENST00000569990 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
HCCAT5-201ENST00000569990 WIZO95785 1651 aa17.72■□□□□ 0.43
HCCAT5-201ENST00000569990 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
HCCAT5-201ENST00000569990 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
HCCAT5-201ENST00000569990 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
HCCAT5-201ENST00000569990 NESP48681 1621 aa17.45■□□□□ 0.38
HCCAT5-201ENST00000569990 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
HCCAT5-201ENST00000569990 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
HCCAT5-201ENST00000569990 ADRA2BP18089 450 aa17.38■□□□□ 0.37
HCCAT5-201ENST00000569990 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
HCCAT5-201ENST00000569990 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
HCCAT5-201ENST00000569990 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
HCCAT5-201ENST00000569990 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
HCCAT5-201ENST00000569990 CFTRP13569 1480 aa17.3■□□□□ 0.36
HCCAT5-201ENST00000569990 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
HCCAT5-201ENST00000569990 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
HCCAT5-201ENST00000569990 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
HCCAT5-201ENST00000569990 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
HCCAT5-201ENST00000569990 CUX2O14529 1486 aa17.16■□□□□ 0.34
HCCAT5-201ENST00000569990 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
HCCAT5-201ENST00000569990 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
HCCAT5-201ENST00000569990 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
HCCAT5-201ENST00000569990 WDR62O43379 1518 aa17.06■□□□□ 0.32
HCCAT5-201ENST00000569990 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
HCCAT5-201ENST00000569990 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
HCCAT5-201ENST00000569990 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
HCCAT5-201ENST00000569990 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
HCCAT5-201ENST00000569990 CUX1P39880 1505 aa16.81■□□□□ 0.28
HCCAT5-201ENST00000569990 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
HCCAT5-201ENST00000569990 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
HCCAT5-201ENST00000569990 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
HCCAT5-201ENST00000569990 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
HCCAT5-201ENST00000569990 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
HCCAT5-201ENST00000569990 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
HCCAT5-201ENST00000569990 SOGA1O94964 1423 aa16.7■□□□□ 0.26
HCCAT5-201ENST00000569990 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
HCCAT5-201ENST00000569990 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
HCCAT5-201ENST00000569990 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
HCCAT5-201ENST00000569990 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
HCCAT5-201ENST00000569990 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
HCCAT5-201ENST00000569990 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.25
HCCAT5-201ENST00000569990 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
HCCAT5-201ENST00000569990 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
HCCAT5-201ENST00000569990 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
HCCAT5-201ENST00000569990 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
HCCAT5-201ENST00000569990 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.23
HCCAT5-201ENST00000569990 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
HCCAT5-201ENST00000569990 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
HCCAT5-201ENST00000569990 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
HCCAT5-201ENST00000569990 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
HCCAT5-201ENST00000569990 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
HCCAT5-201ENST00000569990 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
HCCAT5-201ENST00000569990 CHD1O14646 1710 aa16.41■□□□□ 0.22
HCCAT5-201ENST00000569990 FBLN2P98095 1184 aa16.39■□□□□ 0.21
HCCAT5-201ENST00000569990 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
HCCAT5-201ENST00000569990 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
HCCAT5-201ENST00000569990 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
HCCAT5-201ENST00000569990 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
HCCAT5-201ENST00000569990 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
HCCAT5-201ENST00000569990 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
HCCAT5-201ENST00000569990 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
HCCAT5-201ENST00000569990 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
HCCAT5-201ENST00000569990 IGF1RP08069 1367 aa16.29■□□□□ 0.2
HCCAT5-201ENST00000569990 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
HCCAT5-201ENST00000569990 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
HCCAT5-201ENST00000569990 CUL7Q14999 1698 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms