RNA–Protein interactions for RNA: ENST00000569772.1

HERC2-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-212ENST00000569772 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
HERC2-212ENST00000569772 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
HERC2-212ENST00000569772 ABCC9O60706 1549 aa24.69■■□□□ 1.54
HERC2-212ENST00000569772 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
HERC2-212ENST00000569772 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
HERC2-212ENST00000569772 NACADO15069 1562 aa23.97■■□□□ 1.43
HERC2-212ENST00000569772 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
HERC2-212ENST00000569772 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
HERC2-212ENST00000569772 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
HERC2-212ENST00000569772 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
HERC2-212ENST00000569772 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
HERC2-212ENST00000569772 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
HERC2-212ENST00000569772 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
HERC2-212ENST00000569772 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
HERC2-212ENST00000569772 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
HERC2-212ENST00000569772 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
HERC2-212ENST00000569772 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
HERC2-212ENST00000569772 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
HERC2-212ENST00000569772 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
HERC2-212ENST00000569772 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
HERC2-212ENST00000569772 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
HERC2-212ENST00000569772 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
HERC2-212ENST00000569772 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
HERC2-212ENST00000569772 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
HERC2-212ENST00000569772 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
HERC2-212ENST00000569772 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
HERC2-212ENST00000569772 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
HERC2-212ENST00000569772 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
HERC2-212ENST00000569772 WIZO95785 1651 aa21.91■■□□□ 1.1
HERC2-212ENST00000569772 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
HERC2-212ENST00000569772 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
HERC2-212ENST00000569772 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
HERC2-212ENST00000569772 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
HERC2-212ENST00000569772 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
HERC2-212ENST00000569772 NESP48681 1621 aa21.44■■□□□ 1.02
HERC2-212ENST00000569772 CFTRP13569 1480 aa21.41■■□□□ 1.02
HERC2-212ENST00000569772 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
HERC2-212ENST00000569772 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
HERC2-212ENST00000569772 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
HERC2-212ENST00000569772 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
HERC2-212ENST00000569772 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
HERC2-212ENST00000569772 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
HERC2-212ENST00000569772 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
HERC2-212ENST00000569772 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
HERC2-212ENST00000569772 CUX2O14529 1486 aa21.07■□□□□ 0.96
HERC2-212ENST00000569772 WDR62O43379 1518 aa21.04■□□□□ 0.96
HERC2-212ENST00000569772 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
HERC2-212ENST00000569772 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
HERC2-212ENST00000569772 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
HERC2-212ENST00000569772 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
HERC2-212ENST00000569772 CUX1P39880 1505 aa20.81■□□□□ 0.92
HERC2-212ENST00000569772 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
HERC2-212ENST00000569772 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
HERC2-212ENST00000569772 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
HERC2-212ENST00000569772 TOP2BQ02880 1626 aa20.7■□□□□ 0.9
HERC2-212ENST00000569772 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
HERC2-212ENST00000569772 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
HERC2-212ENST00000569772 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
HERC2-212ENST00000569772 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
HERC2-212ENST00000569772 SOGA1O94964 1423 aa20.61■□□□□ 0.89
HERC2-212ENST00000569772 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
HERC2-212ENST00000569772 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
HERC2-212ENST00000569772 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
HERC2-212ENST00000569772 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
HERC2-212ENST00000569772 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
HERC2-212ENST00000569772 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■■□ 26.1
HERC2-212ENST00000569772 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
HERC2-212ENST00000569772 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
HERC2-212ENST00000569772 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
HERC2-212ENST00000569772 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
HERC2-212ENST00000569772 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
HERC2-212ENST00000569772 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
HERC2-212ENST00000569772 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
HERC2-212ENST00000569772 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
HERC2-212ENST00000569772 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
HERC2-212ENST00000569772 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
HERC2-212ENST00000569772 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
HERC2-212ENST00000569772 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
HERC2-212ENST00000569772 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
HERC2-212ENST00000569772 IGF1RP08069 1367 aa20.2■□□□□ 0.82
HERC2-212ENST00000569772 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
HERC2-212ENST00000569772 CHD1O14646 1710 aa20.16■□□□□ 0.82
HERC2-212ENST00000569772 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
HERC2-212ENST00000569772 CUL7Q14999 1698 aa20.13■□□□□ 0.81
HERC2-212ENST00000569772 RUSC2Q8N2Y8 1516 aa20.13■□□□□ 0.81
HERC2-212ENST00000569772 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
HERC2-212ENST00000569772 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
HERC2-212ENST00000569772 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
HERC2-212ENST00000569772 EEA1Q15075 1411 aa20.1■□□□□ 0.81
HERC2-212ENST00000569772 FBLN2P98095 1184 aa20.08■□□□□ 0.81
HERC2-212ENST00000569772 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
HERC2-212ENST00000569772 NUP160Q12769 1436 aa20.06■□□□□ 0.8
HERC2-212ENST00000569772 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
HERC2-212ENST00000569772 PRXQ9BXM0 1461 aa20■□□□□ 0.79
HERC2-212ENST00000569772 CEP170Q5SW79 1584 aa20■□□□□ 0.79
HERC2-212ENST00000569772 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
HERC2-212ENST00000569772 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
HERC2-212ENST00000569772 KIAA0586Q9BVV6 1533 aa19.9■□□□□ 0.78
HERC2-212ENST00000569772 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
HERC2-212ENST00000569772 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms