RNA–Protein interactions for RNA: ENST00000569352.6

CNN2-210, Transcript of calponin 2, humanhuman

TSL 5

Gene CNN2, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-210ENST00000569352 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
CNN2-210ENST00000569352 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
CNN2-210ENST00000569352 ABCC9O60706 1549 aa29.98■■■□□ 2.39
CNN2-210ENST00000569352 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
CNN2-210ENST00000569352 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
CNN2-210ENST00000569352 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
CNN2-210ENST00000569352 NACADO15069 1562 aa29.18■■■□□ 2.26
CNN2-210ENST00000569352 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
CNN2-210ENST00000569352 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
CNN2-210ENST00000569352 SCRIBQ14160 1630 aa28.39■■■□□ 2.13
CNN2-210ENST00000569352 UNC13AQ9UPW8 1703 aa28.33■■■□□ 2.13
CNN2-210ENST00000569352 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
CNN2-210ENST00000569352 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
CNN2-210ENST00000569352 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
CNN2-210ENST00000569352 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
CNN2-210ENST00000569352 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
CNN2-210ENST00000569352 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
CNN2-210ENST00000569352 SMARCA4P51532 1647 aa27.22■■□□□ 1.95
CNN2-210ENST00000569352 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
CNN2-210ENST00000569352 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
CNN2-210ENST00000569352 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
CNN2-210ENST00000569352 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
CNN2-210ENST00000569352 SMARCA2P51531 1590 aa27■■□□□ 1.91
CNN2-210ENST00000569352 ATAD2BQ9ULI0 1458 aa26.99■■□□□ 1.91
CNN2-210ENST00000569352 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
CNN2-210ENST00000569352 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
CNN2-210ENST00000569352 WIZO95785 1651 aa26.85■■□□□ 1.89
CNN2-210ENST00000569352 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
CNN2-210ENST00000569352 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
CNN2-210ENST00000569352 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
CNN2-210ENST00000569352 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
CNN2-210ENST00000569352 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
CNN2-210ENST00000569352 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
CNN2-210ENST00000569352 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
CNN2-210ENST00000569352 CFTRP13569 1480 aa26.1■■□□□ 1.77
CNN2-210ENST00000569352 NESP48681 1621 aa26.06■■□□□ 1.76
CNN2-210ENST00000569352 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
CNN2-210ENST00000569352 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
CNN2-210ENST00000569352 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
CNN2-210ENST00000569352 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
CNN2-210ENST00000569352 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
CNN2-210ENST00000569352 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
CNN2-210ENST00000569352 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
CNN2-210ENST00000569352 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
CNN2-210ENST00000569352 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
CNN2-210ENST00000569352 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
CNN2-210ENST00000569352 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
CNN2-210ENST00000569352 WDR62O43379 1518 aa25.5■■□□□ 1.67
CNN2-210ENST00000569352 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
CNN2-210ENST00000569352 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
CNN2-210ENST00000569352 CUX1P39880 1505 aa25.43■■□□□ 1.66
CNN2-210ENST00000569352 CUX2O14529 1486 aa25.4■■□□□ 1.66
CNN2-210ENST00000569352 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
CNN2-210ENST00000569352 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
CNN2-210ENST00000569352 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
CNN2-210ENST00000569352 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
CNN2-210ENST00000569352 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
CNN2-210ENST00000569352 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
CNN2-210ENST00000569352 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
CNN2-210ENST00000569352 SOGA1O94964 1423 aa25.24■■□□□ 1.63
CNN2-210ENST00000569352 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
CNN2-210ENST00000569352 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
CNN2-210ENST00000569352 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
CNN2-210ENST00000569352 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
CNN2-210ENST00000569352 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
CNN2-210ENST00000569352 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
CNN2-210ENST00000569352 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
CNN2-210ENST00000569352 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.591e-6■■■□□ 18.2
CNN2-210ENST00000569352 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
CNN2-210ENST00000569352 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
CNN2-210ENST00000569352 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
CNN2-210ENST00000569352 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
CNN2-210ENST00000569352 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
CNN2-210ENST00000569352 EEA1Q15075 1411 aa24.84■■□□□ 1.57
CNN2-210ENST00000569352 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
CNN2-210ENST00000569352 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
CNN2-210ENST00000569352 IGF1RP08069 1367 aa24.79■■□□□ 1.56
CNN2-210ENST00000569352 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
CNN2-210ENST00000569352 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
CNN2-210ENST00000569352 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
CNN2-210ENST00000569352 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
CNN2-210ENST00000569352 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.54
CNN2-210ENST00000569352 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
CNN2-210ENST00000569352 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
CNN2-210ENST00000569352 CUL7Q14999 1698 aa24.66■■□□□ 1.54
CNN2-210ENST00000569352 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
CNN2-210ENST00000569352 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
CNN2-210ENST00000569352 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
CNN2-210ENST00000569352 FBLN2P98095 1184 aa24.63■■□□□ 1.53
CNN2-210ENST00000569352 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
CNN2-210ENST00000569352 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
CNN2-210ENST00000569352 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
CNN2-210ENST00000569352 CHD1O14646 1710 aa24.51■■□□□ 1.51
CNN2-210ENST00000569352 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
CNN2-210ENST00000569352 KIF21BO75037 1637 aa24.46■■□□□ 1.51
CNN2-210ENST00000569352 NUP160Q12769 1436 aa24.41■■□□□ 1.5
CNN2-210ENST00000569352 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
CNN2-210ENST00000569352 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
CNN2-210ENST00000569352 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
CNN2-210ENST00000569352 KIAA0586Q9BVV6 1533 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms