RNA–Protein interactions for RNA: ENST00000569346.5

ITGA11-207, Transcript of integrin subunit alpha 11, humanhuman

TSL 4

Gene ITGA11, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA11-207ENST00000569346 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
ITGA11-207ENST00000569346 ABCC9O60706 1549 aa30.77■■■□□ 2.52
ITGA11-207ENST00000569346 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
ITGA11-207ENST00000569346 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
ITGA11-207ENST00000569346 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
ITGA11-207ENST00000569346 NACADO15069 1562 aa28.67■■■□□ 2.18
ITGA11-207ENST00000569346 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.17
ITGA11-207ENST00000569346 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
ITGA11-207ENST00000569346 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
ITGA11-207ENST00000569346 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.11
ITGA11-207ENST00000569346 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
ITGA11-207ENST00000569346 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
ITGA11-207ENST00000569346 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
ITGA11-207ENST00000569346 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
ITGA11-207ENST00000569346 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
ITGA11-207ENST00000569346 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
ITGA11-207ENST00000569346 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
ITGA11-207ENST00000569346 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
ITGA11-207ENST00000569346 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
ITGA11-207ENST00000569346 CUX2O14529 1486 aa26.72■■□□□ 1.87
ITGA11-207ENST00000569346 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
ITGA11-207ENST00000569346 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
ITGA11-207ENST00000569346 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
ITGA11-207ENST00000569346 NESP48681 1621 aa26.28■■□□□ 1.8
ITGA11-207ENST00000569346 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
ITGA11-207ENST00000569346 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
ITGA11-207ENST00000569346 SMARCA4P51532 1647 aa26.15■■□□□ 1.78
ITGA11-207ENST00000569346 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
ITGA11-207ENST00000569346 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
ITGA11-207ENST00000569346 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
ITGA11-207ENST00000569346 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
ITGA11-207ENST00000569346 BAZ1AQ9NRL2 1556 aaPredicted RBP25.94■■□□□ 1.74
ITGA11-207ENST00000569346 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
ITGA11-207ENST00000569346 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
ITGA11-207ENST00000569346 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
ITGA11-207ENST00000569346 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
ITGA11-207ENST00000569346 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
ITGA11-207ENST00000569346 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
ITGA11-207ENST00000569346 WDR62O43379 1518 aa25.61■■□□□ 1.69
ITGA11-207ENST00000569346 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
ITGA11-207ENST00000569346 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
ITGA11-207ENST00000569346 WIZO95785 1651 aa25.39■■□□□ 1.65
ITGA11-207ENST00000569346 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
ITGA11-207ENST00000569346 CFTRP13569 1480 aa25.25■■□□□ 1.63
ITGA11-207ENST00000569346 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
ITGA11-207ENST00000569346 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
ITGA11-207ENST00000569346 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
ITGA11-207ENST00000569346 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
ITGA11-207ENST00000569346 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
ITGA11-207ENST00000569346 ARHGEF11O15085 1522 aa25.01■■□□□ 1.59
ITGA11-207ENST00000569346 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
ITGA11-207ENST00000569346 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
ITGA11-207ENST00000569346 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
ITGA11-207ENST00000569346 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
ITGA11-207ENST00000569346 CYB5RLQ6IPT4 315 aa24.89■■□□□ 1.58
ITGA11-207ENST00000569346 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
ITGA11-207ENST00000569346 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
ITGA11-207ENST00000569346 TRHP20396 242 aaPredicted RBP24.79■■□□□ 1.56
ITGA11-207ENST00000569346 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
ITGA11-207ENST00000569346 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
ITGA11-207ENST00000569346 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
ITGA11-207ENST00000569346 CHD1O14646 1710 aa24.71■■□□□ 1.55
ITGA11-207ENST00000569346 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.55
ITGA11-207ENST00000569346 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
ITGA11-207ENST00000569346 FBLN2P98095 1184 aa24.65■■□□□ 1.54
ITGA11-207ENST00000569346 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
ITGA11-207ENST00000569346 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
ITGA11-207ENST00000569346 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
ITGA11-207ENST00000569346 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
ITGA11-207ENST00000569346 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
ITGA11-207ENST00000569346 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
ITGA11-207ENST00000569346 SOGA1O94964 1423 aa24.43■■□□□ 1.5
ITGA11-207ENST00000569346 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
ITGA11-207ENST00000569346 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
ITGA11-207ENST00000569346 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
ITGA11-207ENST00000569346 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
ITGA11-207ENST00000569346 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
ITGA11-207ENST00000569346 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
ITGA11-207ENST00000569346 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
ITGA11-207ENST00000569346 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
ITGA11-207ENST00000569346 GAPVD1Q14C86 1478 aa24.22■■□□□ 1.47
ITGA11-207ENST00000569346 CUX1P39880 1505 aa24.2■■□□□ 1.47
ITGA11-207ENST00000569346 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
ITGA11-207ENST00000569346 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
ITGA11-207ENST00000569346 ABCA5Q8WWZ7 1642 aa24■■□□□ 1.43
ITGA11-207ENST00000569346 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
ITGA11-207ENST00000569346 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
ITGA11-207ENST00000569346 CEP170Q5SW79 1584 aa23.93■■□□□ 1.42
ITGA11-207ENST00000569346 NUP160Q12769 1436 aa23.9■■□□□ 1.42
ITGA11-207ENST00000569346 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
ITGA11-207ENST00000569346 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
ITGA11-207ENST00000569346 KIF13AQ9H1H9 1805 aa23.83■■□□□ 1.41
ITGA11-207ENST00000569346 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
ITGA11-207ENST00000569346 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
ITGA11-207ENST00000569346 PRG4Q92954 1404 aaPredicted RBP23.73■■□□□ 1.39
ITGA11-207ENST00000569346 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
ITGA11-207ENST00000569346 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
ITGA11-207ENST00000569346 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
ITGA11-207ENST00000569346 ABCC10Q5T3U5 1492 aa23.66■■□□□ 1.38
ITGA11-207ENST00000569346 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms