RNA–Protein interactions for RNA: ENST00000569322.1

NUP93-218, Transcript of nucleoporin 93, humanhuman

TSL 3

Gene NUP93, Length 410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-218ENST00000569322 NISCHQ9Y2I1 1504 aa19.85■□□□□ 0.77
NUP93-218ENST00000569322 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
NUP93-218ENST00000569322 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
NUP93-218ENST00000569322 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
NUP93-218ENST00000569322 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
NUP93-218ENST00000569322 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
NUP93-218ENST00000569322 ABCC9O60706 1549 aa16.39■□□□□ 0.21
NUP93-218ENST00000569322 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
NUP93-218ENST00000569322 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
NUP93-218ENST00000569322 NACADO15069 1562 aa16.22■□□□□ 0.19
NUP93-218ENST00000569322 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
NUP93-218ENST00000569322 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
NUP93-218ENST00000569322 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
NUP93-218ENST00000569322 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
NUP93-218ENST00000569322 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
NUP93-218ENST00000569322 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
NUP93-218ENST00000569322 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
NUP93-218ENST00000569322 SUPT5HO00267 1087 aaKnown RBP15.35■□□□□ 0.05
NUP93-218ENST00000569322 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
NUP93-218ENST00000569322 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
NUP93-218ENST00000569322 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
NUP93-218ENST00000569322 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
NUP93-218ENST00000569322 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
NUP93-218ENST00000569322 WIZO95785 1651 aa15.18■□□□□ 0.02
NUP93-218ENST00000569322 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
NUP93-218ENST00000569322 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
NUP93-218ENST00000569322 SMARCA2P51531 1590 aa15.08■□□□□ 0
NUP93-218ENST00000569322 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
NUP93-218ENST00000569322 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
NUP93-218ENST00000569322 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
NUP93-218ENST00000569322 HMGXB3Q12766 1538 aa14.96□□□□□ -0.02
NUP93-218ENST00000569322 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
NUP93-218ENST00000569322 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
NUP93-218ENST00000569322 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
NUP93-218ENST00000569322 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.03
NUP93-218ENST00000569322 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
NUP93-218ENST00000569322 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
NUP93-218ENST00000569322 CFTRP13569 1480 aa14.57□□□□□ -0.08
NUP93-218ENST00000569322 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
NUP93-218ENST00000569322 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
NUP93-218ENST00000569322 LAMC3Q9Y6N6 1575 aa14.49□□□□□ -0.09
NUP93-218ENST00000569322 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
NUP93-218ENST00000569322 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
NUP93-218ENST00000569322 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
NUP93-218ENST00000569322 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
NUP93-218ENST00000569322 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
NUP93-218ENST00000569322 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
NUP93-218ENST00000569322 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
NUP93-218ENST00000569322 NESP48681 1621 aa14.35□□□□□ -0.11
NUP93-218ENST00000569322 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
NUP93-218ENST00000569322 CUX1P39880 1505 aa14.31□□□□□ -0.12
NUP93-218ENST00000569322 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
NUP93-218ENST00000569322 EEA1Q15075 1411 aa14.29□□□□□ -0.12
NUP93-218ENST00000569322 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
NUP93-218ENST00000569322 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
NUP93-218ENST00000569322 FOXD1Q16676 465 aa14.24□□□□□ -0.13
NUP93-218ENST00000569322 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
NUP93-218ENST00000569322 SOGA1O94964 1423 aa14.18□□□□□ -0.14
NUP93-218ENST00000569322 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
NUP93-218ENST00000569322 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
NUP93-218ENST00000569322 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
NUP93-218ENST00000569322 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
NUP93-218ENST00000569322 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
NUP93-218ENST00000569322 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
NUP93-218ENST00000569322 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
NUP93-218ENST00000569322 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
NUP93-218ENST00000569322 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
NUP93-218ENST00000569322 KIF21BO75037 1637 aa14.1□□□□□ -0.15
NUP93-218ENST00000569322 WDR62O43379 1518 aa14.1□□□□□ -0.15
NUP93-218ENST00000569322 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
NUP93-218ENST00000569322 ABCA10Q8WWZ4 1543 aa14.08□□□□□ -0.16
NUP93-218ENST00000569322 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
NUP93-218ENST00000569322 CUX2O14529 1486 aa14.06□□□□□ -0.16
NUP93-218ENST00000569322 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
NUP93-218ENST00000569322 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
NUP93-218ENST00000569322 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
NUP93-218ENST00000569322 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
NUP93-218ENST00000569322 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
NUP93-218ENST00000569322 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
NUP93-218ENST00000569322 IFT140Q96RY7 1462 aa13.98□□□□□ -0.17
NUP93-218ENST00000569322 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
NUP93-218ENST00000569322 CUL7Q14999 1698 aa13.98□□□□□ -0.17
NUP93-218ENST00000569322 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.18
NUP93-218ENST00000569322 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
NUP93-218ENST00000569322 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
NUP93-218ENST00000569322 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
NUP93-218ENST00000569322 IGF1RP08069 1367 aa13.92□□□□□ -0.18
NUP93-218ENST00000569322 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
NUP93-218ENST00000569322 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
NUP93-218ENST00000569322 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
NUP93-218ENST00000569322 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
NUP93-218ENST00000569322 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
NUP93-218ENST00000569322 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
NUP93-218ENST00000569322 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
NUP93-218ENST00000569322 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
NUP93-218ENST00000569322 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
NUP93-218ENST00000569322 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
NUP93-218ENST00000569322 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP93-218ENST00000569322 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
NUP93-218ENST00000569322 CLIP1P30622 1438 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms