RNA–Protein interactions for RNA: ENST00000569152.1

SNX33-202, Transcript of sorting nexin 33, humanhuman

TSL 2

Gene SNX33, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33-202ENST00000569152 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
SNX33-202ENST00000569152 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
SNX33-202ENST00000569152 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
SNX33-202ENST00000569152 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
SNX33-202ENST00000569152 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
SNX33-202ENST00000569152 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
SNX33-202ENST00000569152 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
SNX33-202ENST00000569152 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
SNX33-202ENST00000569152 NACADO15069 1562 aa28.07■■■□□ 2.08
SNX33-202ENST00000569152 ABCC9O60706 1549 aa28.01■■■□□ 2.07
SNX33-202ENST00000569152 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
SNX33-202ENST00000569152 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
SNX33-202ENST00000569152 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
SNX33-202ENST00000569152 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
SNX33-202ENST00000569152 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
SNX33-202ENST00000569152 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
SNX33-202ENST00000569152 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
SNX33-202ENST00000569152 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SNX33-202ENST00000569152 WIZO95785 1651 aa26.99■■□□□ 1.91
SNX33-202ENST00000569152 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.89
SNX33-202ENST00000569152 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
SNX33-202ENST00000569152 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
SNX33-202ENST00000569152 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
SNX33-202ENST00000569152 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
SNX33-202ENST00000569152 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
SNX33-202ENST00000569152 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
SNX33-202ENST00000569152 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
SNX33-202ENST00000569152 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
SNX33-202ENST00000569152 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
SNX33-202ENST00000569152 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
SNX33-202ENST00000569152 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
SNX33-202ENST00000569152 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
SNX33-202ENST00000569152 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
SNX33-202ENST00000569152 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
SNX33-202ENST00000569152 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
SNX33-202ENST00000569152 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
SNX33-202ENST00000569152 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
SNX33-202ENST00000569152 EEA1Q15075 1411 aa25.79■■□□□ 1.72
SNX33-202ENST00000569152 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
SNX33-202ENST00000569152 SOGA1O94964 1423 aa25.71■■□□□ 1.71
SNX33-202ENST00000569152 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
SNX33-202ENST00000569152 HRCP23327 699 aa25.65■■□□□ 1.7
SNX33-202ENST00000569152 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
SNX33-202ENST00000569152 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
SNX33-202ENST00000569152 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
SNX33-202ENST00000569152 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
SNX33-202ENST00000569152 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
SNX33-202ENST00000569152 PRDM2Q13029 1718 aa25.53■■□□□ 1.68
SNX33-202ENST00000569152 CFTRP13569 1480 aa25.51■■□□□ 1.67
SNX33-202ENST00000569152 TNIKQ9UKE5 1360 aa25.51■■□□□ 1.67
SNX33-202ENST00000569152 KIF21BO75037 1637 aa25.48■■□□□ 1.67
SNX33-202ENST00000569152 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
SNX33-202ENST00000569152 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
SNX33-202ENST00000569152 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
SNX33-202ENST00000569152 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.66
SNX33-202ENST00000569152 CUX1P39880 1505 aa25.35■■□□□ 1.65
SNX33-202ENST00000569152 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
SNX33-202ENST00000569152 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
SNX33-202ENST00000569152 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
SNX33-202ENST00000569152 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
SNX33-202ENST00000569152 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
SNX33-202ENST00000569152 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
SNX33-202ENST00000569152 CLIP1P30622 1438 aa25.06■■□□□ 1.6
SNX33-202ENST00000569152 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
SNX33-202ENST00000569152 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
SNX33-202ENST00000569152 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
SNX33-202ENST00000569152 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
SNX33-202ENST00000569152 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
SNX33-202ENST00000569152 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
SNX33-202ENST00000569152 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
SNX33-202ENST00000569152 CUX2O14529 1486 aa24.87■■□□□ 1.57
SNX33-202ENST00000569152 NESP48681 1621 aa24.84■■□□□ 1.57
SNX33-202ENST00000569152 IGF1RP08069 1367 aa24.81■■□□□ 1.56
SNX33-202ENST00000569152 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
SNX33-202ENST00000569152 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
SNX33-202ENST00000569152 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
SNX33-202ENST00000569152 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
SNX33-202ENST00000569152 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
SNX33-202ENST00000569152 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
SNX33-202ENST00000569152 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
SNX33-202ENST00000569152 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
SNX33-202ENST00000569152 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
SNX33-202ENST00000569152 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.54
SNX33-202ENST00000569152 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
SNX33-202ENST00000569152 CUL7Q14999 1698 aa24.62■■□□□ 1.53
SNX33-202ENST00000569152 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
SNX33-202ENST00000569152 APLP2Q06481 763 aa24.59■■□□□ 1.53
SNX33-202ENST00000569152 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
SNX33-202ENST00000569152 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
SNX33-202ENST00000569152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
SNX33-202ENST00000569152 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
SNX33-202ENST00000569152 CCER1Q8TC90 406 aaPredicted RBP24.49■■□□□ 1.51
SNX33-202ENST00000569152 CTTNBP2Q8WZ74 1663 aa24.48■■□□□ 1.51
SNX33-202ENST00000569152 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
SNX33-202ENST00000569152 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
SNX33-202ENST00000569152 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
SNX33-202ENST00000569152 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
SNX33-202ENST00000569152 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
SNX33-202ENST00000569152 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
SNX33-202ENST00000569152 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms