RNA–Protein interactions for RNA: ENST00000569042.5

PDPR-211, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 4

Gene PDPR, Length 598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-211ENST00000569042 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
PDPR-211ENST00000569042 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
PDPR-211ENST00000569042 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
PDPR-211ENST00000569042 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
PDPR-211ENST00000569042 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
PDPR-211ENST00000569042 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
PDPR-211ENST00000569042 ABCC9O60706 1549 aa19.85■□□□□ 0.77
PDPR-211ENST00000569042 NACADO15069 1562 aa19.78■□□□□ 0.76
PDPR-211ENST00000569042 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
PDPR-211ENST00000569042 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
PDPR-211ENST00000569042 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
PDPR-211ENST00000569042 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
PDPR-211ENST00000569042 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
PDPR-211ENST00000569042 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
PDPR-211ENST00000569042 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
PDPR-211ENST00000569042 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
PDPR-211ENST00000569042 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
PDPR-211ENST00000569042 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
PDPR-211ENST00000569042 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
PDPR-211ENST00000569042 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDPR-211ENST00000569042 WIZO95785 1651 aa18.54■□□□□ 0.56
PDPR-211ENST00000569042 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
PDPR-211ENST00000569042 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
PDPR-211ENST00000569042 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
PDPR-211ENST00000569042 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
PDPR-211ENST00000569042 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
PDPR-211ENST00000569042 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
PDPR-211ENST00000569042 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
PDPR-211ENST00000569042 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
PDPR-211ENST00000569042 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
PDPR-211ENST00000569042 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
PDPR-211ENST00000569042 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
PDPR-211ENST00000569042 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
PDPR-211ENST00000569042 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
PDPR-211ENST00000569042 CFTRP13569 1480 aa17.78■□□□□ 0.44
PDPR-211ENST00000569042 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
PDPR-211ENST00000569042 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
PDPR-211ENST00000569042 EEA1Q15075 1411 aa17.71■□□□□ 0.43
PDPR-211ENST00000569042 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
PDPR-211ENST00000569042 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
PDPR-211ENST00000569042 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
PDPR-211ENST00000569042 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
PDPR-211ENST00000569042 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
PDPR-211ENST00000569042 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
PDPR-211ENST00000569042 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
PDPR-211ENST00000569042 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
PDPR-211ENST00000569042 CUX1P39880 1505 aa17.48■□□□□ 0.39
PDPR-211ENST00000569042 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
PDPR-211ENST00000569042 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
PDPR-211ENST00000569042 SOGA1O94964 1423 aa17.43■□□□□ 0.38
PDPR-211ENST00000569042 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
PDPR-211ENST00000569042 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
PDPR-211ENST00000569042 NESP48681 1621 aa17.39■□□□□ 0.37
PDPR-211ENST00000569042 KIF21BO75037 1637 aa17.38■□□□□ 0.37
PDPR-211ENST00000569042 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
PDPR-211ENST00000569042 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
PDPR-211ENST00000569042 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
PDPR-211ENST00000569042 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
PDPR-211ENST00000569042 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
PDPR-211ENST00000569042 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
PDPR-211ENST00000569042 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
PDPR-211ENST00000569042 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
PDPR-211ENST00000569042 CUX2O14529 1486 aa17.24■□□□□ 0.35
PDPR-211ENST00000569042 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
PDPR-211ENST00000569042 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
PDPR-211ENST00000569042 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
PDPR-211ENST00000569042 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
PDPR-211ENST00000569042 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
PDPR-211ENST00000569042 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
PDPR-211ENST00000569042 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
PDPR-211ENST00000569042 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
PDPR-211ENST00000569042 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
PDPR-211ENST00000569042 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
PDPR-211ENST00000569042 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
PDPR-211ENST00000569042 CUL7Q14999 1698 aa17.13■□□□□ 0.33
PDPR-211ENST00000569042 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
PDPR-211ENST00000569042 WDR62O43379 1518 aa17.11■□□□□ 0.33
PDPR-211ENST00000569042 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
PDPR-211ENST00000569042 IGF1RP08069 1367 aa17.07■□□□□ 0.32
PDPR-211ENST00000569042 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
PDPR-211ENST00000569042 CLIP1P30622 1438 aa17.05■□□□□ 0.32
PDPR-211ENST00000569042 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
PDPR-211ENST00000569042 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
PDPR-211ENST00000569042 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
PDPR-211ENST00000569042 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
PDPR-211ENST00000569042 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
PDPR-211ENST00000569042 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
PDPR-211ENST00000569042 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
PDPR-211ENST00000569042 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
PDPR-211ENST00000569042 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
PDPR-211ENST00000569042 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
PDPR-211ENST00000569042 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
PDPR-211ENST00000569042 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
PDPR-211ENST00000569042 APLP2Q06481 763 aa16.88■□□□□ 0.29
PDPR-211ENST00000569042 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
PDPR-211ENST00000569042 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
PDPR-211ENST00000569042 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
PDPR-211ENST00000569042 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
PDPR-211ENST00000569042 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDPR-211ENST00000569042 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 229.6 ms