RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 NISCHQ9Y2I1 1504 aa33.71■■■□□ 2.99
KLHDC4-222ENST00000568444 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
KLHDC4-222ENST00000568444 ABCC9O60706 1549 aa28.7■■■□□ 2.19
KLHDC4-222ENST00000568444 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
KLHDC4-222ENST00000568444 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
KLHDC4-222ENST00000568444 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
KLHDC4-222ENST00000568444 NACADO15069 1562 aa27.86■■■□□ 2.05
KLHDC4-222ENST00000568444 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
KLHDC4-222ENST00000568444 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
KLHDC4-222ENST00000568444 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
KLHDC4-222ENST00000568444 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
KLHDC4-222ENST00000568444 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
KLHDC4-222ENST00000568444 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
KLHDC4-222ENST00000568444 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
KLHDC4-222ENST00000568444 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
KLHDC4-222ENST00000568444 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
KLHDC4-222ENST00000568444 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
KLHDC4-222ENST00000568444 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
KLHDC4-222ENST00000568444 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
KLHDC4-222ENST00000568444 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
KLHDC4-222ENST00000568444 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
KLHDC4-222ENST00000568444 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
KLHDC4-222ENST00000568444 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
KLHDC4-222ENST00000568444 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
KLHDC4-222ENST00000568444 WIZO95785 1651 aa25.78■■□□□ 1.72
KLHDC4-222ENST00000568444 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
KLHDC4-222ENST00000568444 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
KLHDC4-222ENST00000568444 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
KLHDC4-222ENST00000568444 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
KLHDC4-222ENST00000568444 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
KLHDC4-222ENST00000568444 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
KLHDC4-222ENST00000568444 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
KLHDC4-222ENST00000568444 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
KLHDC4-222ENST00000568444 NESP48681 1621 aa24.97■■□□□ 1.59
KLHDC4-222ENST00000568444 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
KLHDC4-222ENST00000568444 CFTRP13569 1480 aa24.92■■□□□ 1.58
KLHDC4-222ENST00000568444 PRDM2Q13029 1718 aa24.84■■□□□ 1.57
KLHDC4-222ENST00000568444 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
KLHDC4-222ENST00000568444 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
KLHDC4-222ENST00000568444 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
KLHDC4-222ENST00000568444 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
KLHDC4-222ENST00000568444 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
KLHDC4-222ENST00000568444 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
KLHDC4-222ENST00000568444 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
KLHDC4-222ENST00000568444 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
KLHDC4-222ENST00000568444 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
KLHDC4-222ENST00000568444 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
KLHDC4-222ENST00000568444 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
KLHDC4-222ENST00000568444 WDR62O43379 1518 aa24.4■■□□□ 1.5
KLHDC4-222ENST00000568444 CUX1P39880 1505 aa24.37■■□□□ 1.49
KLHDC4-222ENST00000568444 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
KLHDC4-222ENST00000568444 SYNJ1O43426 1573 aa24.33■■□□□ 1.49
KLHDC4-222ENST00000568444 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
KLHDC4-222ENST00000568444 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
KLHDC4-222ENST00000568444 CUX2O14529 1486 aa24.23■■□□□ 1.47
KLHDC4-222ENST00000568444 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
KLHDC4-222ENST00000568444 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
KLHDC4-222ENST00000568444 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
KLHDC4-222ENST00000568444 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
KLHDC4-222ENST00000568444 SOGA1O94964 1423 aa24.1■■□□□ 1.45
KLHDC4-222ENST00000568444 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
KLHDC4-222ENST00000568444 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
KLHDC4-222ENST00000568444 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
KLHDC4-222ENST00000568444 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
KLHDC4-222ENST00000568444 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
KLHDC4-222ENST00000568444 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
KLHDC4-222ENST00000568444 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
KLHDC4-222ENST00000568444 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
KLHDC4-222ENST00000568444 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
KLHDC4-222ENST00000568444 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
KLHDC4-222ENST00000568444 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
KLHDC4-222ENST00000568444 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
KLHDC4-222ENST00000568444 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
KLHDC4-222ENST00000568444 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
KLHDC4-222ENST00000568444 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
KLHDC4-222ENST00000568444 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
KLHDC4-222ENST00000568444 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
KLHDC4-222ENST00000568444 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.38
KLHDC4-222ENST00000568444 EEA1Q15075 1411 aa23.7■■□□□ 1.38
KLHDC4-222ENST00000568444 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
KLHDC4-222ENST00000568444 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
KLHDC4-222ENST00000568444 IGF1RP08069 1367 aa23.65■■□□□ 1.38
KLHDC4-222ENST00000568444 CUL7Q14999 1698 aa23.64■■□□□ 1.37
KLHDC4-222ENST00000568444 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
KLHDC4-222ENST00000568444 CSRNP3Q8WYN3 585 aa23.59■■□□□ 1.37
KLHDC4-222ENST00000568444 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
KLHDC4-222ENST00000568444 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
KLHDC4-222ENST00000568444 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
KLHDC4-222ENST00000568444 FBLN2P98095 1184 aa23.54■■□□□ 1.36
KLHDC4-222ENST00000568444 CHD1O14646 1710 aa23.53■■□□□ 1.36
KLHDC4-222ENST00000568444 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
KLHDC4-222ENST00000568444 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
KLHDC4-222ENST00000568444 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
KLHDC4-222ENST00000568444 GRIN2AQ12879 1464 aa23.47■■□□□ 1.35
KLHDC4-222ENST00000568444 KIF21BO75037 1637 aa23.44■■□□□ 1.34
KLHDC4-222ENST00000568444 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
KLHDC4-222ENST00000568444 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
KLHDC4-222ENST00000568444 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
KLHDC4-222ENST00000568444 NUP160Q12769 1436 aa23.31■■□□□ 1.32
KLHDC4-222ENST00000568444 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 416.3 ms