RNA–Protein interactions for RNA: ENST00000568399.1

RSRP1-218, Transcript of arginine and serine rich protein 1, humanhuman

TSL 4

Gene RSRP1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-218ENST00000568399 AEBP2Q6ZN18 517 aaPredicted RBP31.28■■■□□ 2.6
RSRP1-218ENST00000568399 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
RSRP1-218ENST00000568399 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
RSRP1-218ENST00000568399 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
RSRP1-218ENST00000568399 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
RSRP1-218ENST00000568399 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
RSRP1-218ENST00000568399 FOXD1Q16676 465 aa24.94■■□□□ 1.58
RSRP1-218ENST00000568399 ABCC9O60706 1549 aa24.65■■□□□ 1.54
RSRP1-218ENST00000568399 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
RSRP1-218ENST00000568399 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
RSRP1-218ENST00000568399 NACADO15069 1562 aa23.83■■□□□ 1.41
RSRP1-218ENST00000568399 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
RSRP1-218ENST00000568399 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
RSRP1-218ENST00000568399 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
RSRP1-218ENST00000568399 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
RSRP1-218ENST00000568399 MSH5O43196 834 aa23.43■■□□□ 1.34
RSRP1-218ENST00000568399 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
RSRP1-218ENST00000568399 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
RSRP1-218ENST00000568399 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
RSRP1-218ENST00000568399 ADRA2BP18089 450 aa23.16■■□□□ 1.3
RSRP1-218ENST00000568399 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
RSRP1-218ENST00000568399 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
RSRP1-218ENST00000568399 POTEDQ86YR6 584 aa23.08■■□□□ 1.29
RSRP1-218ENST00000568399 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
RSRP1-218ENST00000568399 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
RSRP1-218ENST00000568399 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
RSRP1-218ENST00000568399 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
RSRP1-218ENST00000568399 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
RSRP1-218ENST00000568399 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
RSRP1-218ENST00000568399 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
RSRP1-218ENST00000568399 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
RSRP1-218ENST00000568399 SMARCA2P51531 1590 aa22■■□□□ 1.11
RSRP1-218ENST00000568399 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
RSRP1-218ENST00000568399 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
RSRP1-218ENST00000568399 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
RSRP1-218ENST00000568399 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
RSRP1-218ENST00000568399 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
RSRP1-218ENST00000568399 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
RSRP1-218ENST00000568399 WIZO95785 1651 aa21.82■■□□□ 1.08
RSRP1-218ENST00000568399 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
RSRP1-218ENST00000568399 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
RSRP1-218ENST00000568399 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
RSRP1-218ENST00000568399 NESP48681 1621 aa21.36■■□□□ 1.01
RSRP1-218ENST00000568399 MAPK8IP2Q13387 824 aaPredicted RBP21.31■■□□□ 1
RSRP1-218ENST00000568399 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
RSRP1-218ENST00000568399 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
RSRP1-218ENST00000568399 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
RSRP1-218ENST00000568399 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
RSRP1-218ENST00000568399 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
RSRP1-218ENST00000568399 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
RSRP1-218ENST00000568399 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
RSRP1-218ENST00000568399 CFTRP13569 1480 aa21.21■□□□□ 0.99
RSRP1-218ENST00000568399 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
RSRP1-218ENST00000568399 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
RSRP1-218ENST00000568399 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
RSRP1-218ENST00000568399 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
RSRP1-218ENST00000568399 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
RSRP1-218ENST00000568399 CUX2O14529 1486 aa21.01■□□□□ 0.95
RSRP1-218ENST00000568399 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
RSRP1-218ENST00000568399 WDR62O43379 1518 aa20.94■□□□□ 0.94
RSRP1-218ENST00000568399 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
RSRP1-218ENST00000568399 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
RSRP1-218ENST00000568399 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
RSRP1-218ENST00000568399 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
RSRP1-218ENST00000568399 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
RSRP1-218ENST00000568399 CUX1P39880 1505 aa20.65■□□□□ 0.9
RSRP1-218ENST00000568399 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
RSRP1-218ENST00000568399 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
RSRP1-218ENST00000568399 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
RSRP1-218ENST00000568399 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
RSRP1-218ENST00000568399 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
RSRP1-218ENST00000568399 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
RSRP1-218ENST00000568399 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
RSRP1-218ENST00000568399 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
RSRP1-218ENST00000568399 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
RSRP1-218ENST00000568399 SOGA1O94964 1423 aa20.48■□□□□ 0.87
RSRP1-218ENST00000568399 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
RSRP1-218ENST00000568399 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
RSRP1-218ENST00000568399 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
RSRP1-218ENST00000568399 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
RSRP1-218ENST00000568399 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
RSRP1-218ENST00000568399 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
RSRP1-218ENST00000568399 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.85
RSRP1-218ENST00000568399 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
RSRP1-218ENST00000568399 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
RSRP1-218ENST00000568399 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
RSRP1-218ENST00000568399 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
RSRP1-218ENST00000568399 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
RSRP1-218ENST00000568399 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
RSRP1-218ENST00000568399 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
RSRP1-218ENST00000568399 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
RSRP1-218ENST00000568399 CHD1O14646 1710 aa20.22■□□□□ 0.83
RSRP1-218ENST00000568399 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
RSRP1-218ENST00000568399 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
RSRP1-218ENST00000568399 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
RSRP1-218ENST00000568399 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
RSRP1-218ENST00000568399 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
RSRP1-218ENST00000568399 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
RSRP1-218ENST00000568399 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
RSRP1-218ENST00000568399 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 514.7 ms