RNA–Protein interactions for RNA: ENST00000568155.2

CDH5-207, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-207ENST00000568155 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
CDH5-207ENST00000568155 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
CDH5-207ENST00000568155 ABCC9O60706 1549 aa32.27■■■□□ 2.76
CDH5-207ENST00000568155 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
CDH5-207ENST00000568155 RB1CC1Q8TDY2 1594 aa31.17■■■□□ 2.58
CDH5-207ENST00000568155 NACADO15069 1562 aa31.17■■■□□ 2.58
CDH5-207ENST00000568155 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
CDH5-207ENST00000568155 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
CDH5-207ENST00000568155 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
CDH5-207ENST00000568155 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
CDH5-207ENST00000568155 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
CDH5-207ENST00000568155 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
CDH5-207ENST00000568155 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
CDH5-207ENST00000568155 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
CDH5-207ENST00000568155 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
CDH5-207ENST00000568155 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
CDH5-207ENST00000568155 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
CDH5-207ENST00000568155 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
CDH5-207ENST00000568155 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CDH5-207ENST00000568155 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
CDH5-207ENST00000568155 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
CDH5-207ENST00000568155 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
CDH5-207ENST00000568155 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
CDH5-207ENST00000568155 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
CDH5-207ENST00000568155 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
CDH5-207ENST00000568155 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
CDH5-207ENST00000568155 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
CDH5-207ENST00000568155 RSF1Q96T23 1441 aaPredicted RBP28.45■■■□□ 2.15
CDH5-207ENST00000568155 WIZO95785 1651 aa28.39■■■□□ 2.14
CDH5-207ENST00000568155 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
CDH5-207ENST00000568155 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
CDH5-207ENST00000568155 LAMC3Q9Y6N6 1575 aa27.97■■■□□ 2.07
CDH5-207ENST00000568155 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
CDH5-207ENST00000568155 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
CDH5-207ENST00000568155 NESP48681 1621 aa27.89■■■□□ 2.06
CDH5-207ENST00000568155 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
CDH5-207ENST00000568155 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.04
CDH5-207ENST00000568155 CFTRP13569 1480 aa27.74■■■□□ 2.03
CDH5-207ENST00000568155 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
CDH5-207ENST00000568155 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
CDH5-207ENST00000568155 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
CDH5-207ENST00000568155 CUX2O14529 1486 aa27.54■■■□□ 2
CDH5-207ENST00000568155 PRDM2Q13029 1718 aa27.52■■■□□ 2
CDH5-207ENST00000568155 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
CDH5-207ENST00000568155 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
CDH5-207ENST00000568155 WDR62O43379 1518 aa27.31■■□□□ 1.96
CDH5-207ENST00000568155 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
CDH5-207ENST00000568155 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
CDH5-207ENST00000568155 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
CDH5-207ENST00000568155 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
CDH5-207ENST00000568155 IFT140Q96RY7 1462 aa27■■□□□ 1.91
CDH5-207ENST00000568155 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
CDH5-207ENST00000568155 CUX1P39880 1505 aa26.9■■□□□ 1.9
CDH5-207ENST00000568155 SOGA1O94964 1423 aa26.89■■□□□ 1.89
CDH5-207ENST00000568155 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
CDH5-207ENST00000568155 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
CDH5-207ENST00000568155 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
CDH5-207ENST00000568155 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
CDH5-207ENST00000568155 RAD54L2Q9Y4B4 1467 aa26.75■■□□□ 1.87
CDH5-207ENST00000568155 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
CDH5-207ENST00000568155 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
CDH5-207ENST00000568155 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
CDH5-207ENST00000568155 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
CDH5-207ENST00000568155 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
CDH5-207ENST00000568155 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.86
CDH5-207ENST00000568155 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
CDH5-207ENST00000568155 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
CDH5-207ENST00000568155 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
CDH5-207ENST00000568155 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
CDH5-207ENST00000568155 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
CDH5-207ENST00000568155 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
CDH5-207ENST00000568155 FBLN2P98095 1184 aa26.5■■□□□ 1.83
CDH5-207ENST00000568155 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
CDH5-207ENST00000568155 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
CDH5-207ENST00000568155 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
CDH5-207ENST00000568155 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
CDH5-207ENST00000568155 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
CDH5-207ENST00000568155 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
CDH5-207ENST00000568155 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
CDH5-207ENST00000568155 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
CDH5-207ENST00000568155 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
CDH5-207ENST00000568155 CHD1O14646 1710 aa26.29■■□□□ 1.8
CDH5-207ENST00000568155 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
CDH5-207ENST00000568155 IGF1RP08069 1367 aa26.2■■□□□ 1.78
CDH5-207ENST00000568155 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
CDH5-207ENST00000568155 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
CDH5-207ENST00000568155 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
CDH5-207ENST00000568155 CUL7Q14999 1698 aa26.12■■□□□ 1.77
CDH5-207ENST00000568155 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
CDH5-207ENST00000568155 EEA1Q15075 1411 aa26.01■■□□□ 1.75
CDH5-207ENST00000568155 NUP160Q12769 1436 aa26■■□□□ 1.75
CDH5-207ENST00000568155 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
CDH5-207ENST00000568155 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
CDH5-207ENST00000568155 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
CDH5-207ENST00000568155 RAPGEF2Q9Y4G8 1499 aa25.94■■□□□ 1.74
CDH5-207ENST00000568155 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
CDH5-207ENST00000568155 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CDH5-207ENST00000568155 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
CDH5-207ENST00000568155 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
CDH5-207ENST00000568155 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms