RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
TCF4-236ENST00000567880 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
TCF4-236ENST00000567880 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
TCF4-236ENST00000567880 ABCC9O60706 1549 aa20.16■□□□□ 0.82
TCF4-236ENST00000567880 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
TCF4-236ENST00000567880 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
TCF4-236ENST00000567880 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
TCF4-236ENST00000567880 NACADO15069 1562 aa19.68■□□□□ 0.74
TCF4-236ENST00000567880 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
TCF4-236ENST00000567880 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
TCF4-236ENST00000567880 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
TCF4-236ENST00000567880 UNC13AQ9UPW8 1703 aa19.27■□□□□ 0.68
TCF4-236ENST00000567880 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
TCF4-236ENST00000567880 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
TCF4-236ENST00000567880 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
TCF4-236ENST00000567880 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
TCF4-236ENST00000567880 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
TCF4-236ENST00000567880 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
TCF4-236ENST00000567880 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
TCF4-236ENST00000567880 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.56
TCF4-236ENST00000567880 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
TCF4-236ENST00000567880 WIZO95785 1651 aa18.48■□□□□ 0.55
TCF4-236ENST00000567880 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
TCF4-236ENST00000567880 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
TCF4-236ENST00000567880 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
TCF4-236ENST00000567880 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
TCF4-236ENST00000567880 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
TCF4-236ENST00000567880 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
TCF4-236ENST00000567880 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
TCF4-236ENST00000567880 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
TCF4-236ENST00000567880 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
TCF4-236ENST00000567880 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
TCF4-236ENST00000567880 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
TCF4-236ENST00000567880 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
TCF4-236ENST00000567880 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
TCF4-236ENST00000567880 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
TCF4-236ENST00000567880 CFTRP13569 1480 aa17.69■□□□□ 0.42
TCF4-236ENST00000567880 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
TCF4-236ENST00000567880 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
TCF4-236ENST00000567880 NESP48681 1621 aa17.63■□□□□ 0.41
TCF4-236ENST00000567880 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
TCF4-236ENST00000567880 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
TCF4-236ENST00000567880 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
TCF4-236ENST00000567880 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
TCF4-236ENST00000567880 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
TCF4-236ENST00000567880 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
TCF4-236ENST00000567880 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
TCF4-236ENST00000567880 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
TCF4-236ENST00000567880 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
TCF4-236ENST00000567880 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
TCF4-236ENST00000567880 CUX1P39880 1505 aa17.4■□□□□ 0.38
TCF4-236ENST00000567880 BIVM-ERCC5R4GMW8 1640 aa17.4■□□□□ 0.38
TCF4-236ENST00000567880 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
TCF4-236ENST00000567880 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
TCF4-236ENST00000567880 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
TCF4-236ENST00000567880 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
TCF4-236ENST00000567880 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
TCF4-236ENST00000567880 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
TCF4-236ENST00000567880 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
TCF4-236ENST00000567880 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
TCF4-236ENST00000567880 SOGA1O94964 1423 aa17.23■□□□□ 0.35
TCF4-236ENST00000567880 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
TCF4-236ENST00000567880 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
TCF4-236ENST00000567880 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
TCF4-236ENST00000567880 WDR62O43379 1518 aa17.16■□□□□ 0.34
TCF4-236ENST00000567880 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
TCF4-236ENST00000567880 EEA1Q15075 1411 aa17.12■□□□□ 0.33
TCF4-236ENST00000567880 CUX2O14529 1486 aa17.1■□□□□ 0.33
TCF4-236ENST00000567880 WDR97A6NE52 1622 aa17.08■□□□□ 0.33
TCF4-236ENST00000567880 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.33
TCF4-236ENST00000567880 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
TCF4-236ENST00000567880 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
TCF4-236ENST00000567880 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
TCF4-236ENST00000567880 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
TCF4-236ENST00000567880 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
TCF4-236ENST00000567880 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
TCF4-236ENST00000567880 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
TCF4-236ENST00000567880 KIF21BO75037 1637 aa16.95■□□□□ 0.3
TCF4-236ENST00000567880 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
TCF4-236ENST00000567880 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
TCF4-236ENST00000567880 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
TCF4-236ENST00000567880 IGF1RP08069 1367 aa16.93■□□□□ 0.3
TCF4-236ENST00000567880 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.3
TCF4-236ENST00000567880 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
TCF4-236ENST00000567880 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
TCF4-236ENST00000567880 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
TCF4-236ENST00000567880 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
TCF4-236ENST00000567880 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
TCF4-236ENST00000567880 CUL7Q14999 1698 aa16.87■□□□□ 0.29
TCF4-236ENST00000567880 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
TCF4-236ENST00000567880 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
TCF4-236ENST00000567880 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
TCF4-236ENST00000567880 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
TCF4-236ENST00000567880 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
TCF4-236ENST00000567880 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
TCF4-236ENST00000567880 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
TCF4-236ENST00000567880 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
TCF4-236ENST00000567880 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
TCF4-236ENST00000567880 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
TCF4-236ENST00000567880 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms