RNA–Protein interactions for RNA: ENST00000567671.1

RAB11A-206, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB11A, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-206ENST00000567671 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
RAB11A-206ENST00000567671 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
RAB11A-206ENST00000567671 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
RAB11A-206ENST00000567671 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
RAB11A-206ENST00000567671 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
RAB11A-206ENST00000567671 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.02
RAB11A-206ENST00000567671 ABCC9O60706 1549 aa14.73□□□□□ -0.05
RAB11A-206ENST00000567671 FOXD1Q16676 465 aa14.52□□□□□ -0.09
RAB11A-206ENST00000567671 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
RAB11A-206ENST00000567671 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
RAB11A-206ENST00000567671 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
RAB11A-206ENST00000567671 NACADO15069 1562 aa14.29□□□□□ -0.12
RAB11A-206ENST00000567671 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
RAB11A-206ENST00000567671 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
RAB11A-206ENST00000567671 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
RAB11A-206ENST00000567671 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
RAB11A-206ENST00000567671 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAB11A-206ENST00000567671 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
RAB11A-206ENST00000567671 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
RAB11A-206ENST00000567671 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
RAB11A-206ENST00000567671 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
RAB11A-206ENST00000567671 ADRA2BP18089 450 aa13.58□□□□□ -0.24
RAB11A-206ENST00000567671 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
RAB11A-206ENST00000567671 MSH5O43196 834 aa13.47□□□□□ -0.25
RAB11A-206ENST00000567671 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
RAB11A-206ENST00000567671 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
RAB11A-206ENST00000567671 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
RAB11A-206ENST00000567671 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
RAB11A-206ENST00000567671 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
RAB11A-206ENST00000567671 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
RAB11A-206ENST00000567671 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
RAB11A-206ENST00000567671 RSF1Q96T23 1441 aaPredicted RBP13.24□□□□□ -0.29
RAB11A-206ENST00000567671 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
RAB11A-206ENST00000567671 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
RAB11A-206ENST00000567671 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
RAB11A-206ENST00000567671 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
RAB11A-206ENST00000567671 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
RAB11A-206ENST00000567671 SUPT5HO00267 1087 aaKnown RBP13.15□□□□□ -0.3
RAB11A-206ENST00000567671 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
RAB11A-206ENST00000567671 WIZO95785 1651 aa13.12□□□□□ -0.31
RAB11A-206ENST00000567671 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
RAB11A-206ENST00000567671 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
RAB11A-206ENST00000567671 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
RAB11A-206ENST00000567671 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
RAB11A-206ENST00000567671 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
RAB11A-206ENST00000567671 CFTRP13569 1480 aa12.79□□□□□ -0.36
RAB11A-206ENST00000567671 NESP48681 1621 aa12.77□□□□□ -0.36
RAB11A-206ENST00000567671 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
RAB11A-206ENST00000567671 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
RAB11A-206ENST00000567671 FANCD2Q9BXW9 1451 aa12.69□□□□□ -0.38
RAB11A-206ENST00000567671 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
RAB11A-206ENST00000567671 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
RAB11A-206ENST00000567671 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
RAB11A-206ENST00000567671 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
RAB11A-206ENST00000567671 ABCC8Q09428 1581 aa12.55□□□□□ -0.4
RAB11A-206ENST00000567671 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
RAB11A-206ENST00000567671 WDR62O43379 1518 aa12.51□□□□□ -0.41
RAB11A-206ENST00000567671 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
RAB11A-206ENST00000567671 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
RAB11A-206ENST00000567671 DNMBPQ6XZF7 1577 aa12.49□□□□□ -0.41
RAB11A-206ENST00000567671 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
RAB11A-206ENST00000567671 CUX2O14529 1486 aa12.48□□□□□ -0.41
RAB11A-206ENST00000567671 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
RAB11A-206ENST00000567671 CUX1P39880 1505 aa12.45□□□□□ -0.42
RAB11A-206ENST00000567671 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
RAB11A-206ENST00000567671 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
RAB11A-206ENST00000567671 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
RAB11A-206ENST00000567671 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
RAB11A-206ENST00000567671 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
RAB11A-206ENST00000567671 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
RAB11A-206ENST00000567671 SOGA1O94964 1423 aa12.39□□□□□ -0.43
RAB11A-206ENST00000567671 DMRT2Q9Y5R5 561 aa12.38□□□□□ -0.43
RAB11A-206ENST00000567671 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
RAB11A-206ENST00000567671 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
RAB11A-206ENST00000567671 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
RAB11A-206ENST00000567671 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
RAB11A-206ENST00000567671 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
RAB11A-206ENST00000567671 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
RAB11A-206ENST00000567671 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.44
RAB11A-206ENST00000567671 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
RAB11A-206ENST00000567671 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
RAB11A-206ENST00000567671 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.459e-9■■■■□ 19.4
RAB11A-206ENST00000567671 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
RAB11A-206ENST00000567671 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
RAB11A-206ENST00000567671 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
RAB11A-206ENST00000567671 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
RAB11A-206ENST00000567671 EEA1Q15075 1411 aa12.19□□□□□ -0.46
RAB11A-206ENST00000567671 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
RAB11A-206ENST00000567671 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
RAB11A-206ENST00000567671 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
RAB11A-206ENST00000567671 MAGI1Q96QZ7 1491 aaPredicted RBP12.15□□□□□ -0.46
RAB11A-206ENST00000567671 FBLN2P98095 1184 aa12.15□□□□□ -0.46
RAB11A-206ENST00000567671 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.46
RAB11A-206ENST00000567671 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
RAB11A-206ENST00000567671 IGF1RP08069 1367 aa12.14□□□□□ -0.47
RAB11A-206ENST00000567671 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
RAB11A-206ENST00000567671 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
RAB11A-206ENST00000567671 RUSC2Q8N2Y8 1516 aa12.12□□□□□ -0.47
RAB11A-206ENST00000567671 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
RAB11A-206ENST00000567671 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms