RNA–Protein interactions for RNA: ENST00000567606.5

PML-218, Transcript of promyelocytic leukemia, humanhuman

TSL 1 (best)

Gene PML, Length 2,042 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-218ENST00000567606 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
PML-218ENST00000567606 CCDC180Q9P1Z9 1646 aa36.94■■■■□ 3.5
PML-218ENST00000567606 ZCCHC6Q5VYS8 1495 aaKnown RBP35.56■■■■□ 3.28
PML-218ENST00000567606 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
PML-218ENST00000567606 ABCC9O60706 1549 aa34.77■■■■□ 3.16
PML-218ENST00000567606 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
PML-218ENST00000567606 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
PML-218ENST00000567606 SHROOM4Q9ULL8 1493 aa34.61■■■■□ 3.13
PML-218ENST00000567606 NACADO15069 1562 aa34.35■■■■□ 3.09
PML-218ENST00000567606 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
PML-218ENST00000567606 SCRIBQ14160 1630 aa33.88■■■■□ 3.01
PML-218ENST00000567606 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
PML-218ENST00000567606 UNC13AQ9UPW8 1703 aa33.43■■■□□ 2.94
PML-218ENST00000567606 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
PML-218ENST00000567606 CECR2Q9BXF3 1484 aa32.82■■■□□ 2.85
PML-218ENST00000567606 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
PML-218ENST00000567606 PABPN1Q86U42 306 aaKnown RBP eCLIP32.74■■■□□ 2.83
PML-218ENST00000567606 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
PML-218ENST00000567606 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
PML-218ENST00000567606 SMARCA4P51532 1647 aa32.53■■■□□ 2.8
PML-218ENST00000567606 WIZO95785 1651 aa32.4■■■□□ 2.78
PML-218ENST00000567606 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.76
PML-218ENST00000567606 PEG3Q9GZU2 1588 aa32.17■■■□□ 2.74
PML-218ENST00000567606 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
PML-218ENST00000567606 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
PML-218ENST00000567606 SMARCA2P51531 1590 aa31.96■■■□□ 2.71
PML-218ENST00000567606 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.71
PML-218ENST00000567606 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.68
PML-218ENST00000567606 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
PML-218ENST00000567606 NCAPD3P42695 1498 aa31.69■■■□□ 2.66
PML-218ENST00000567606 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
PML-218ENST00000567606 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
PML-218ENST00000567606 TRIM41Q8WV44 630 aa31.42■■■□□ 2.62
PML-218ENST00000567606 LOC105371045A0A1W2PR82 267 aa31.1■■■□□ 2.57
PML-218ENST00000567606 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
PML-218ENST00000567606 CFTRP13569 1480 aa31■■■□□ 2.55
PML-218ENST00000567606 FAM9AQ8IZU1 332 aaPredicted RBP30.93■■■□□ 2.54
PML-218ENST00000567606 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
PML-218ENST00000567606 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
PML-218ENST00000567606 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
PML-218ENST00000567606 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
PML-218ENST00000567606 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
PML-218ENST00000567606 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
PML-218ENST00000567606 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
PML-218ENST00000567606 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
PML-218ENST00000567606 SOGA1O94964 1423 aa30.58■■■□□ 2.49
PML-218ENST00000567606 NESP48681 1621 aa30.56■■■□□ 2.48
PML-218ENST00000567606 CUX1P39880 1505 aa30.54■■■□□ 2.48
PML-218ENST00000567606 EHMT2Q96KQ7 1210 aa30.52■■■□□ 2.48
PML-218ENST00000567606 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.47
PML-218ENST00000567606 EEA1Q15075 1411 aa30.5■■■□□ 2.47
PML-218ENST00000567606 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
PML-218ENST00000567606 CSRNP3Q8WYN3 585 aa30.36■■■□□ 2.45
PML-218ENST00000567606 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
PML-218ENST00000567606 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
PML-218ENST00000567606 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
PML-218ENST00000567606 KIF21AQ7Z4S6 1674 aa30.26■■■□□ 2.43
PML-218ENST00000567606 TOPBP1Q92547 1522 aa30.2■■■□□ 2.43
PML-218ENST00000567606 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
PML-218ENST00000567606 URB2Q14146 1524 aaKnown RBP30.15■■■□□ 2.42
PML-218ENST00000567606 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
PML-218ENST00000567606 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
PML-218ENST00000567606 KIF21BO75037 1637 aa30.12■■■□□ 2.41
PML-218ENST00000567606 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
PML-218ENST00000567606 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
PML-218ENST00000567606 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PML-218ENST00000567606 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
PML-218ENST00000567606 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
PML-218ENST00000567606 CUX2O14529 1486 aa29.98■■■□□ 2.39
PML-218ENST00000567606 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
PML-218ENST00000567606 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.39
PML-218ENST00000567606 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
PML-218ENST00000567606 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
PML-218ENST00000567606 RAPGEF2Q9Y4G8 1499 aa29.92■■■□□ 2.38
PML-218ENST00000567606 WDR97A6NE52 1622 aa29.91■■■□□ 2.38
PML-218ENST00000567606 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
PML-218ENST00000567606 ERICH3Q5RHP9 1530 aa29.88■■■□□ 2.37
PML-218ENST00000567606 WDR62O43379 1518 aa29.85■■■□□ 2.37
PML-218ENST00000567606 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
PML-218ENST00000567606 IGF1RP08069 1367 aa29.79■■■□□ 2.36
PML-218ENST00000567606 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
PML-218ENST00000567606 THOC2Q8NI27 1593 aaKnown RBP29.76■■■□□ 2.35
PML-218ENST00000567606 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
PML-218ENST00000567606 CLIP1P30622 1438 aa29.69■■■□□ 2.34
PML-218ENST00000567606 CUL7Q14999 1698 aa29.64■■■□□ 2.34
PML-218ENST00000567606 PPARGC1BQ86YN6 1023 aaKnown RBP29.64■■■□□ 2.33
PML-218ENST00000567606 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.33
PML-218ENST00000567606 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
PML-218ENST00000567606 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
PML-218ENST00000567606 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
PML-218ENST00000567606 HRCP23327 699 aa29.55■■■□□ 2.32
PML-218ENST00000567606 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
PML-218ENST00000567606 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
PML-218ENST00000567606 VPS8Q8N3P4 1428 aa29.48■■■□□ 2.31
PML-218ENST00000567606 AQRO60306 1485 aaKnown RBP eCLIP29.43■■■□□ 2.31e-6■■■■■ 29.8
PML-218ENST00000567606 ZNF608Q9ULD9 1512 aaPredicted RBP29.42■■■□□ 2.3
PML-218ENST00000567606 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
PML-218ENST00000567606 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
PML-218ENST00000567606 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
PML-218ENST00000567606 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms