RNA–Protein interactions for RNA: ENST00000567529.1

SCAMP5-212, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 2

Gene SCAMP5, Length 966 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-212ENST00000567529 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
SCAMP5-212ENST00000567529 ABCC9O60706 1549 aa24.63■■□□□ 1.53
SCAMP5-212ENST00000567529 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
SCAMP5-212ENST00000567529 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
SCAMP5-212ENST00000567529 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
SCAMP5-212ENST00000567529 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
SCAMP5-212ENST00000567529 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
SCAMP5-212ENST00000567529 NACADO15069 1562 aa22.49■■□□□ 1.19
SCAMP5-212ENST00000567529 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
SCAMP5-212ENST00000567529 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
SCAMP5-212ENST00000567529 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
SCAMP5-212ENST00000567529 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
SCAMP5-212ENST00000567529 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
SCAMP5-212ENST00000567529 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
SCAMP5-212ENST00000567529 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
SCAMP5-212ENST00000567529 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
SCAMP5-212ENST00000567529 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
SCAMP5-212ENST00000567529 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
SCAMP5-212ENST00000567529 CUX2O14529 1486 aa21.59■■□□□ 1.05
SCAMP5-212ENST00000567529 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
SCAMP5-212ENST00000567529 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
SCAMP5-212ENST00000567529 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
SCAMP5-212ENST00000567529 NESP48681 1621 aa20.83■□□□□ 0.93
SCAMP5-212ENST00000567529 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
SCAMP5-212ENST00000567529 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
SCAMP5-212ENST00000567529 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
SCAMP5-212ENST00000567529 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
SCAMP5-212ENST00000567529 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
SCAMP5-212ENST00000567529 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
SCAMP5-212ENST00000567529 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
SCAMP5-212ENST00000567529 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
SCAMP5-212ENST00000567529 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
SCAMP5-212ENST00000567529 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
SCAMP5-212ENST00000567529 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
SCAMP5-212ENST00000567529 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
SCAMP5-212ENST00000567529 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SCAMP5-212ENST00000567529 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
SCAMP5-212ENST00000567529 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
SCAMP5-212ENST00000567529 WIZO95785 1651 aa20.42■□□□□ 0.86
SCAMP5-212ENST00000567529 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
SCAMP5-212ENST00000567529 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
SCAMP5-212ENST00000567529 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
SCAMP5-212ENST00000567529 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
SCAMP5-212ENST00000567529 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
SCAMP5-212ENST00000567529 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
SCAMP5-212ENST00000567529 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
SCAMP5-212ENST00000567529 WDR62O43379 1518 aa20.26■□□□□ 0.83
SCAMP5-212ENST00000567529 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
SCAMP5-212ENST00000567529 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
SCAMP5-212ENST00000567529 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
SCAMP5-212ENST00000567529 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
SCAMP5-212ENST00000567529 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
SCAMP5-212ENST00000567529 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
SCAMP5-212ENST00000567529 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
SCAMP5-212ENST00000567529 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
SCAMP5-212ENST00000567529 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
SCAMP5-212ENST00000567529 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
SCAMP5-212ENST00000567529 ILDR1Q86SU0 546 aaPredicted RBP19.72■□□□□ 0.75
SCAMP5-212ENST00000567529 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
SCAMP5-212ENST00000567529 CFTRP13569 1480 aa19.66■□□□□ 0.74
SCAMP5-212ENST00000567529 FBLN2P98095 1184 aa19.65■□□□□ 0.74
SCAMP5-212ENST00000567529 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
SCAMP5-212ENST00000567529 CHD1O14646 1710 aa19.59■□□□□ 0.73
SCAMP5-212ENST00000567529 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
SCAMP5-212ENST00000567529 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
SCAMP5-212ENST00000567529 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.71
SCAMP5-212ENST00000567529 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
SCAMP5-212ENST00000567529 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
SCAMP5-212ENST00000567529 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
SCAMP5-212ENST00000567529 CLASP1Q7Z460 1538 aa19.33■□□□□ 0.68
SCAMP5-212ENST00000567529 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
SCAMP5-212ENST00000567529 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
SCAMP5-212ENST00000567529 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
SCAMP5-212ENST00000567529 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
SCAMP5-212ENST00000567529 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
SCAMP5-212ENST00000567529 CUX1P39880 1505 aa19.26■□□□□ 0.67
SCAMP5-212ENST00000567529 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
SCAMP5-212ENST00000567529 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
SCAMP5-212ENST00000567529 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
SCAMP5-212ENST00000567529 KDM4FA0A1W2PPD8 638 aa19.2■□□□□ 0.66
SCAMP5-212ENST00000567529 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
SCAMP5-212ENST00000567529 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
SCAMP5-212ENST00000567529 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SCAMP5-212ENST00000567529 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
SCAMP5-212ENST00000567529 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
SCAMP5-212ENST00000567529 SOGA1O94964 1423 aa19.08■□□□□ 0.64
SCAMP5-212ENST00000567529 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
SCAMP5-212ENST00000567529 KIF13AQ9H1H9 1805 aa19.03■□□□□ 0.64
SCAMP5-212ENST00000567529 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
SCAMP5-212ENST00000567529 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
SCAMP5-212ENST00000567529 FAM69CQ0P6D2 419 aa18.98■□□□□ 0.63
SCAMP5-212ENST00000567529 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
SCAMP5-212ENST00000567529 EEA1Q15075 1411 aa18.98■□□□□ 0.63
SCAMP5-212ENST00000567529 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
SCAMP5-212ENST00000567529 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
SCAMP5-212ENST00000567529 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
SCAMP5-212ENST00000567529 KDM6BO15054 1643 aa18.91■□□□□ 0.62
SCAMP5-212ENST00000567529 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
SCAMP5-212ENST00000567529 FBXO41Q8TF61 875 aa18.87■□□□□ 0.61
SCAMP5-212ENST00000567529 HECW2Q9P2P5 1572 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms