RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-231ENST00000567479 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
KIFC3-231ENST00000567479 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
KIFC3-231ENST00000567479 ABCC9O60706 1549 aa20.43■□□□□ 0.86
KIFC3-231ENST00000567479 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
KIFC3-231ENST00000567479 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
KIFC3-231ENST00000567479 NACADO15069 1562 aa19.41■□□□□ 0.7
KIFC3-231ENST00000567479 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
KIFC3-231ENST00000567479 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
KIFC3-231ENST00000567479 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
KIFC3-231ENST00000567479 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
KIFC3-231ENST00000567479 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
KIFC3-231ENST00000567479 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
KIFC3-231ENST00000567479 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
KIFC3-231ENST00000567479 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
KIFC3-231ENST00000567479 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
KIFC3-231ENST00000567479 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
KIFC3-231ENST00000567479 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
KIFC3-231ENST00000567479 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
KIFC3-231ENST00000567479 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
KIFC3-231ENST00000567479 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
KIFC3-231ENST00000567479 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
KIFC3-231ENST00000567479 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
KIFC3-231ENST00000567479 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
KIFC3-231ENST00000567479 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
KIFC3-231ENST00000567479 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
KIFC3-231ENST00000567479 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
KIFC3-231ENST00000567479 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
KIFC3-231ENST00000567479 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
KIFC3-231ENST00000567479 NESP48681 1621 aa17.58■□□□□ 0.41
KIFC3-231ENST00000567479 WIZO95785 1651 aa17.52■□□□□ 0.39
KIFC3-231ENST00000567479 CUX2O14529 1486 aa17.5■□□□□ 0.39
KIFC3-231ENST00000567479 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
KIFC3-231ENST00000567479 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
KIFC3-231ENST00000567479 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
KIFC3-231ENST00000567479 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
KIFC3-231ENST00000567479 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
KIFC3-231ENST00000567479 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
KIFC3-231ENST00000567479 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
KIFC3-231ENST00000567479 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
KIFC3-231ENST00000567479 CFTRP13569 1480 aa17.25■□□□□ 0.35
KIFC3-231ENST00000567479 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
KIFC3-231ENST00000567479 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
KIFC3-231ENST00000567479 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
KIFC3-231ENST00000567479 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
KIFC3-231ENST00000567479 WDR62O43379 1518 aa17.14■□□□□ 0.33
KIFC3-231ENST00000567479 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
KIFC3-231ENST00000567479 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
KIFC3-231ENST00000567479 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
KIFC3-231ENST00000567479 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
KIFC3-231ENST00000567479 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
KIFC3-231ENST00000567479 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
KIFC3-231ENST00000567479 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
KIFC3-231ENST00000567479 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
KIFC3-231ENST00000567479 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
KIFC3-231ENST00000567479 SOGA1O94964 1423 aa16.73■□□□□ 0.27
KIFC3-231ENST00000567479 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
KIFC3-231ENST00000567479 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.27
KIFC3-231ENST00000567479 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
KIFC3-231ENST00000567479 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
KIFC3-231ENST00000567479 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
KIFC3-231ENST00000567479 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
KIFC3-231ENST00000567479 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
KIFC3-231ENST00000567479 CUX1P39880 1505 aa16.65■□□□□ 0.26
KIFC3-231ENST00000567479 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
KIFC3-231ENST00000567479 FBLN2P98095 1184 aa16.65■□□□□ 0.26
KIFC3-231ENST00000567479 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
KIFC3-231ENST00000567479 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
KIFC3-231ENST00000567479 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
KIFC3-231ENST00000567479 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
KIFC3-231ENST00000567479 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
KIFC3-231ENST00000567479 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
KIFC3-231ENST00000567479 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
KIFC3-231ENST00000567479 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
KIFC3-231ENST00000567479 CHD1O14646 1710 aa16.46■□□□□ 0.23
KIFC3-231ENST00000567479 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
KIFC3-231ENST00000567479 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
KIFC3-231ENST00000567479 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
KIFC3-231ENST00000567479 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
KIFC3-231ENST00000567479 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
KIFC3-231ENST00000567479 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
KIFC3-231ENST00000567479 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
KIFC3-231ENST00000567479 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
KIFC3-231ENST00000567479 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
KIFC3-231ENST00000567479 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
KIFC3-231ENST00000567479 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
KIFC3-231ENST00000567479 CLASP1Q7Z460 1538 aa16.33■□□□□ 0.2
KIFC3-231ENST00000567479 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
KIFC3-231ENST00000567479 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
KIFC3-231ENST00000567479 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
KIFC3-231ENST00000567479 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
KIFC3-231ENST00000567479 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
KIFC3-231ENST00000567479 NUP160Q12769 1436 aa16.22■□□□□ 0.19
KIFC3-231ENST00000567479 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
KIFC3-231ENST00000567479 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
KIFC3-231ENST00000567479 IGF1RP08069 1367 aa16.19■□□□□ 0.18
KIFC3-231ENST00000567479 CEP170Q5SW79 1584 aa16.18■□□□□ 0.18
KIFC3-231ENST00000567479 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
KIFC3-231ENST00000567479 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
KIFC3-231ENST00000567479 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
KIFC3-231ENST00000567479 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms