RNA–Protein interactions for RNA: ENST00000567317.5

LINC01227-205, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 2 BASIC

Gene LINC01227, Length 1,338 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-205ENST00000567317 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
LINC01227-205ENST00000567317 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
LINC01227-205ENST00000567317 ABCC9O60706 1549 aa25.04■■□□□ 1.6
LINC01227-205ENST00000567317 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.5
LINC01227-205ENST00000567317 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
LINC01227-205ENST00000567317 NACADO15069 1562 aa24.12■■□□□ 1.45
LINC01227-205ENST00000567317 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
LINC01227-205ENST00000567317 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
LINC01227-205ENST00000567317 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
LINC01227-205ENST00000567317 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
LINC01227-205ENST00000567317 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
LINC01227-205ENST00000567317 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
LINC01227-205ENST00000567317 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
LINC01227-205ENST00000567317 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
LINC01227-205ENST00000567317 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
LINC01227-205ENST00000567317 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
LINC01227-205ENST00000567317 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
LINC01227-205ENST00000567317 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
LINC01227-205ENST00000567317 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
LINC01227-205ENST00000567317 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
LINC01227-205ENST00000567317 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
LINC01227-205ENST00000567317 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
LINC01227-205ENST00000567317 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
LINC01227-205ENST00000567317 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
LINC01227-205ENST00000567317 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
LINC01227-205ENST00000567317 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
LINC01227-205ENST00000567317 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
LINC01227-205ENST00000567317 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
LINC01227-205ENST00000567317 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
LINC01227-205ENST00000567317 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
LINC01227-205ENST00000567317 WIZO95785 1651 aa22.09■■□□□ 1.13
LINC01227-205ENST00000567317 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
LINC01227-205ENST00000567317 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
LINC01227-205ENST00000567317 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
LINC01227-205ENST00000567317 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
LINC01227-205ENST00000567317 NESP48681 1621 aa21.69■■□□□ 1.06
LINC01227-205ENST00000567317 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
LINC01227-205ENST00000567317 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
LINC01227-205ENST00000567317 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.04
LINC01227-205ENST00000567317 CFTRP13569 1480 aa21.54■■□□□ 1.04
LINC01227-205ENST00000567317 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
LINC01227-205ENST00000567317 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
LINC01227-205ENST00000567317 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
LINC01227-205ENST00000567317 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
LINC01227-205ENST00000567317 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
LINC01227-205ENST00000567317 CUX2O14529 1486 aa21.26■□□□□ 0.99
LINC01227-205ENST00000567317 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
LINC01227-205ENST00000567317 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
LINC01227-205ENST00000567317 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
LINC01227-205ENST00000567317 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
LINC01227-205ENST00000567317 WDR62O43379 1518 aa21.15■□□□□ 0.98
LINC01227-205ENST00000567317 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
LINC01227-205ENST00000567317 EEA1Q15075 1411 aa21.13■□□□□ 0.97
LINC01227-205ENST00000567317 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
LINC01227-205ENST00000567317 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
LINC01227-205ENST00000567317 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.96
LINC01227-205ENST00000567317 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
LINC01227-205ENST00000567317 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
LINC01227-205ENST00000567317 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
LINC01227-205ENST00000567317 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
LINC01227-205ENST00000567317 CUX1P39880 1505 aa20.94■□□□□ 0.94
LINC01227-205ENST00000567317 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
LINC01227-205ENST00000567317 SOGA1O94964 1423 aa20.9■□□□□ 0.94
LINC01227-205ENST00000567317 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.93
LINC01227-205ENST00000567317 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
LINC01227-205ENST00000567317 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
LINC01227-205ENST00000567317 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.92
LINC01227-205ENST00000567317 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
LINC01227-205ENST00000567317 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
LINC01227-205ENST00000567317 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
LINC01227-205ENST00000567317 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.91
LINC01227-205ENST00000567317 GOLGA3Q08378 1498 aa20.74■□□□□ 0.91
LINC01227-205ENST00000567317 KIF21BO75037 1637 aa20.74■□□□□ 0.91
LINC01227-205ENST00000567317 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
LINC01227-205ENST00000567317 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
LINC01227-205ENST00000567317 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
LINC01227-205ENST00000567317 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
LINC01227-205ENST00000567317 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
LINC01227-205ENST00000567317 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
LINC01227-205ENST00000567317 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
LINC01227-205ENST00000567317 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
LINC01227-205ENST00000567317 GRIN2BQ13224 1484 aa20.58■□□□□ 0.88
LINC01227-205ENST00000567317 FBLN2P98095 1184 aa20.56■□□□□ 0.88
LINC01227-205ENST00000567317 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
LINC01227-205ENST00000567317 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
LINC01227-205ENST00000567317 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
LINC01227-205ENST00000567317 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
LINC01227-205ENST00000567317 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
LINC01227-205ENST00000567317 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
LINC01227-205ENST00000567317 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
LINC01227-205ENST00000567317 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
LINC01227-205ENST00000567317 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
LINC01227-205ENST00000567317 RAPGEF2Q9Y4G8 1499 aa20.49■□□□□ 0.87
LINC01227-205ENST00000567317 MAGI1Q96QZ7 1491 aaPredicted RBP20.48■□□□□ 0.87
LINC01227-205ENST00000567317 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
LINC01227-205ENST00000567317 IGF1RP08069 1367 aa20.42■□□□□ 0.86
LINC01227-205ENST00000567317 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
LINC01227-205ENST00000567317 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
LINC01227-205ENST00000567317 CLIP1P30622 1438 aa20.38■□□□□ 0.85
LINC01227-205ENST00000567317 TRIM26Q12899 539 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms