RNA–Protein interactions for RNA: ENST00000567066.6

TGFB1I1-212, transforming growth factor beta 1 induced transcript 1, humanhuman

TSL 5

Gene TGFB1I1, Length 1,453 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-212ENST00000567066 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.57
TGFB1I1-212ENST00000567066 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
TGFB1I1-212ENST00000567066 ABCC9O60706 1549 aa37.73■■■■□ 3.63
TGFB1I1-212ENST00000567066 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
TGFB1I1-212ENST00000567066 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
TGFB1I1-212ENST00000567066 NACADO15069 1562 aa36.3■■■■□ 3.4
TGFB1I1-212ENST00000567066 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
TGFB1I1-212ENST00000567066 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.37
TGFB1I1-212ENST00000567066 DCAF1Q9Y4B6 1507 aa36.06■■■■□ 3.36
TGFB1I1-212ENST00000567066 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
TGFB1I1-212ENST00000567066 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
TGFB1I1-212ENST00000567066 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.24
TGFB1I1-212ENST00000567066 BICRAQ9NZM4 1560 aa35.29■■■■□ 3.24
TGFB1I1-212ENST00000567066 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
TGFB1I1-212ENST00000567066 DNAJC5BQ9UF47 199 aa34.52■■■■□ 3.12
TGFB1I1-212ENST00000567066 EIF4G1Q04637 1599 aaKnown RBP34.3■■■■□ 3.08
TGFB1I1-212ENST00000567066 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
TGFB1I1-212ENST00000567066 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
TGFB1I1-212ENST00000567066 SMARCA4P51532 1647 aa33.82■■■■□ 3.01
TGFB1I1-212ENST00000567066 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
TGFB1I1-212ENST00000567066 MROH2BQ7Z745 1585 aa33.67■■■□□ 2.98
TGFB1I1-212ENST00000567066 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
TGFB1I1-212ENST00000567066 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
TGFB1I1-212ENST00000567066 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
TGFB1I1-212ENST00000567066 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
TGFB1I1-212ENST00000567066 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
TGFB1I1-212ENST00000567066 RSF1Q96T23 1441 aaPredicted RBP33.33■■■□□ 2.93
TGFB1I1-212ENST00000567066 WIZO95785 1651 aa33.33■■■□□ 2.93
TGFB1I1-212ENST00000567066 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
TGFB1I1-212ENST00000567066 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
TGFB1I1-212ENST00000567066 NESP48681 1621 aa32.74■■■□□ 2.83
TGFB1I1-212ENST00000567066 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
TGFB1I1-212ENST00000567066 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
TGFB1I1-212ENST00000567066 CCDC88BA6NC98 1476 aa32.56■■■□□ 2.8
TGFB1I1-212ENST00000567066 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
TGFB1I1-212ENST00000567066 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
TGFB1I1-212ENST00000567066 CFTRP13569 1480 aa32.41■■■□□ 2.78
TGFB1I1-212ENST00000567066 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
TGFB1I1-212ENST00000567066 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
TGFB1I1-212ENST00000567066 FANCD2Q9BXW9 1451 aa32.19■■■□□ 2.74
TGFB1I1-212ENST00000567066 PRDM2Q13029 1718 aa32.19■■■□□ 2.74
TGFB1I1-212ENST00000567066 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
TGFB1I1-212ENST00000567066 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
TGFB1I1-212ENST00000567066 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
TGFB1I1-212ENST00000567066 CUX2O14529 1486 aa32.01■■■□□ 2.71
TGFB1I1-212ENST00000567066 WDR62O43379 1518 aa31.94■■■□□ 2.7
TGFB1I1-212ENST00000567066 URB2Q14146 1524 aaKnown RBP31.89■■■□□ 2.7
TGFB1I1-212ENST00000567066 TOPBP1Q92547 1522 aa31.71■■■□□ 2.67
TGFB1I1-212ENST00000567066 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
TGFB1I1-212ENST00000567066 ABCC8Q09428 1581 aa31.64■■■□□ 2.65
TGFB1I1-212ENST00000567066 CUX1P39880 1505 aa31.57■■■□□ 2.64
TGFB1I1-212ENST00000567066 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
TGFB1I1-212ENST00000567066 IFT140Q96RY7 1462 aa31.42■■■□□ 2.62
TGFB1I1-212ENST00000567066 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
TGFB1I1-212ENST00000567066 WRNQ14191 1432 aaPredicted RBP eCLIP31.39■■■□□ 2.61
TGFB1I1-212ENST00000567066 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
TGFB1I1-212ENST00000567066 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
TGFB1I1-212ENST00000567066 RAD54L2Q9Y4B4 1467 aa31.35■■■□□ 2.61
TGFB1I1-212ENST00000567066 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
TGFB1I1-212ENST00000567066 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
TGFB1I1-212ENST00000567066 SOGA1O94964 1423 aa31.31■■■□□ 2.6
TGFB1I1-212ENST00000567066 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
TGFB1I1-212ENST00000567066 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.59
TGFB1I1-212ENST00000567066 AQRO60306 1485 aaKnown RBP eCLIP31.17■■■□□ 2.58
TGFB1I1-212ENST00000567066 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
TGFB1I1-212ENST00000567066 TDRD9Q8NDG6 1382 aaKnown RBP31.14■■■□□ 2.58
TGFB1I1-212ENST00000567066 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
TGFB1I1-212ENST00000567066 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
TGFB1I1-212ENST00000567066 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
TGFB1I1-212ENST00000567066 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
TGFB1I1-212ENST00000567066 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
TGFB1I1-212ENST00000567066 SNAPC4Q5SXM2 1469 aa30.87■■■□□ 2.53
TGFB1I1-212ENST00000567066 DNAJC5Q9H3Z4 198 aa30.85■■■□□ 2.53
TGFB1I1-212ENST00000567066 CHD1O14646 1710 aa30.8■■■□□ 2.52
TGFB1I1-212ENST00000567066 MAGI1Q96QZ7 1491 aaPredicted RBP30.79■■■□□ 2.52
TGFB1I1-212ENST00000567066 TRIM41Q8WV44 630 aa30.76■■■□□ 2.52
TGFB1I1-212ENST00000567066 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
TGFB1I1-212ENST00000567066 FBLN2P98095 1184 aa30.73■■■□□ 2.51
TGFB1I1-212ENST00000567066 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
TGFB1I1-212ENST00000567066 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
TGFB1I1-212ENST00000567066 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
TGFB1I1-212ENST00000567066 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
TGFB1I1-212ENST00000567066 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
TGFB1I1-212ENST00000567066 RUSC2Q8N2Y8 1516 aa30.59■■■□□ 2.49
TGFB1I1-212ENST00000567066 IGF1RP08069 1367 aa30.59■■■□□ 2.49
TGFB1I1-212ENST00000567066 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
TGFB1I1-212ENST00000567066 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
TGFB1I1-212ENST00000567066 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
TGFB1I1-212ENST00000567066 CUL7Q14999 1698 aa30.46■■■□□ 2.47
TGFB1I1-212ENST00000567066 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
TGFB1I1-212ENST00000567066 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
TGFB1I1-212ENST00000567066 CARMIL1Q5VZK9 1371 aa30.39■■■□□ 2.46
TGFB1I1-212ENST00000567066 NUP160Q12769 1436 aa30.39■■■□□ 2.46
TGFB1I1-212ENST00000567066 RIMBP3CA6NJZ7 1639 aa30.28■■■□□ 2.44
TGFB1I1-212ENST00000567066 RIMBP3BA6NNM3 1639 aa30.28■■■□□ 2.44
TGFB1I1-212ENST00000567066 RIMBP3Q9UFD9 1639 aa30.28■■■□□ 2.44
TGFB1I1-212ENST00000567066 ARHGEF11O15085 1522 aa30.28■■■□□ 2.44
TGFB1I1-212ENST00000567066 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
TGFB1I1-212ENST00000567066 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
TGFB1I1-212ENST00000567066 EEA1Q15075 1411 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms