RNA–Protein interactions for RNA: ENST00000567058.1

AC009055.2-201, humanhuman

TSL 5 BASIC

Gene AC009055.2, Length 1,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.2-201ENST00000567058 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
AC009055.2-201ENST00000567058 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
AC009055.2-201ENST00000567058 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
AC009055.2-201ENST00000567058 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
AC009055.2-201ENST00000567058 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
AC009055.2-201ENST00000567058 ABCC9O60706 1549 aa20.12■□□□□ 0.81
AC009055.2-201ENST00000567058 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
AC009055.2-201ENST00000567058 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
AC009055.2-201ENST00000567058 NACADO15069 1562 aa19.42■□□□□ 0.7
AC009055.2-201ENST00000567058 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
AC009055.2-201ENST00000567058 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
AC009055.2-201ENST00000567058 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
AC009055.2-201ENST00000567058 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
AC009055.2-201ENST00000567058 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
AC009055.2-201ENST00000567058 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
AC009055.2-201ENST00000567058 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
AC009055.2-201ENST00000567058 FOXD1Q16676 465 aa18.79■□□□□ 0.6
AC009055.2-201ENST00000567058 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
AC009055.2-201ENST00000567058 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
AC009055.2-201ENST00000567058 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
AC009055.2-201ENST00000567058 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
AC009055.2-201ENST00000567058 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
AC009055.2-201ENST00000567058 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
AC009055.2-201ENST00000567058 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
AC009055.2-201ENST00000567058 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
AC009055.2-201ENST00000567058 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.47
AC009055.2-201ENST00000567058 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
AC009055.2-201ENST00000567058 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
AC009055.2-201ENST00000567058 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
AC009055.2-201ENST00000567058 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
AC009055.2-201ENST00000567058 WIZO95785 1651 aa17.86■□□□□ 0.45
AC009055.2-201ENST00000567058 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
AC009055.2-201ENST00000567058 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.44
AC009055.2-201ENST00000567058 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
AC009055.2-201ENST00000567058 MSH5O43196 834 aa17.71■□□□□ 0.42
AC009055.2-201ENST00000567058 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
AC009055.2-201ENST00000567058 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
AC009055.2-201ENST00000567058 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
AC009055.2-201ENST00000567058 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
AC009055.2-201ENST00000567058 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
AC009055.2-201ENST00000567058 NESP48681 1621 aa17.47■□□□□ 0.39
AC009055.2-201ENST00000567058 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
AC009055.2-201ENST00000567058 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
AC009055.2-201ENST00000567058 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
AC009055.2-201ENST00000567058 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
AC009055.2-201ENST00000567058 ADRA2BP18089 450 aa17.34■□□□□ 0.37
AC009055.2-201ENST00000567058 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
AC009055.2-201ENST00000567058 CFTRP13569 1480 aa17.32■□□□□ 0.36
AC009055.2-201ENST00000567058 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
AC009055.2-201ENST00000567058 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
AC009055.2-201ENST00000567058 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
AC009055.2-201ENST00000567058 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
AC009055.2-201ENST00000567058 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
AC009055.2-201ENST00000567058 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
AC009055.2-201ENST00000567058 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
AC009055.2-201ENST00000567058 CUX2O14529 1486 aa17.08■□□□□ 0.32
AC009055.2-201ENST00000567058 WDR62O43379 1518 aa17.07■□□□□ 0.32
AC009055.2-201ENST00000567058 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
AC009055.2-201ENST00000567058 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
AC009055.2-201ENST00000567058 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
AC009055.2-201ENST00000567058 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
AC009055.2-201ENST00000567058 CUX1P39880 1505 aa16.89■□□□□ 0.3
AC009055.2-201ENST00000567058 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
AC009055.2-201ENST00000567058 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
AC009055.2-201ENST00000567058 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
AC009055.2-201ENST00000567058 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
AC009055.2-201ENST00000567058 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
AC009055.2-201ENST00000567058 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
AC009055.2-201ENST00000567058 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
AC009055.2-201ENST00000567058 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
AC009055.2-201ENST00000567058 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
AC009055.2-201ENST00000567058 SOGA1O94964 1423 aa16.73■□□□□ 0.27
AC009055.2-201ENST00000567058 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
AC009055.2-201ENST00000567058 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
AC009055.2-201ENST00000567058 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
AC009055.2-201ENST00000567058 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
AC009055.2-201ENST00000567058 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
AC009055.2-201ENST00000567058 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
AC009055.2-201ENST00000567058 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
AC009055.2-201ENST00000567058 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
AC009055.2-201ENST00000567058 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
AC009055.2-201ENST00000567058 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
AC009055.2-201ENST00000567058 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
AC009055.2-201ENST00000567058 CHD1O14646 1710 aa16.5■□□□□ 0.23
AC009055.2-201ENST00000567058 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
AC009055.2-201ENST00000567058 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
AC009055.2-201ENST00000567058 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
AC009055.2-201ENST00000567058 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
AC009055.2-201ENST00000567058 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
AC009055.2-201ENST00000567058 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
AC009055.2-201ENST00000567058 FBLN2P98095 1184 aa16.39■□□□□ 0.21
AC009055.2-201ENST00000567058 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
AC009055.2-201ENST00000567058 CUL7Q14999 1698 aa16.36■□□□□ 0.21
AC009055.2-201ENST00000567058 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
AC009055.2-201ENST00000567058 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
AC009055.2-201ENST00000567058 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
AC009055.2-201ENST00000567058 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
AC009055.2-201ENST00000567058 IGF1RP08069 1367 aa16.35■□□□□ 0.21
AC009055.2-201ENST00000567058 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
AC009055.2-201ENST00000567058 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms